RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 PET100P0DJ07 73 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 RBMY1A1P0DJD3 496 aaKnown RBP6.63□□□□□ -1.35
SYN3-211ENST00000472027 RBMY1CP0DJD4 496 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 CXCL3P19876 107 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 CLINT1Q14677 625 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 RBMY1FQ15415 496 aaKnown RBP6.63□□□□□ -1.35
SYN3-211ENST00000472027 PSG3Q16557 428 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 ZNF709Q8N972 641 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 C11orf45Q8TAV5 145 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 PFDN5Q99471 154 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 NPCDR1Q9BY65 106 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 WDR61Q9GZS3 305 aaKnown RBP6.63□□□□□ -1.35
SYN3-211ENST00000472027 TENM3Q9P273 2699 aa6.63□□□□□ -1.35
SYN3-211ENST00000472027 RYR3Q15413 4870 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 AGRNO00468 2067 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 LCE6AA0A183 80 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 A8MTW9 85 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 H3BQ15 152 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 DUSP14O95147 198 aaKnown RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 IGLC2P0DOY2 106 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 CXCL2P19875 107 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 RPL12P30050 165 aaKnown RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 CNN1P51911 297 aaKnown RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 CEMP1Q6PRD7 247 aaPredicted RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 LCN15Q6UWW0 184 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 ZNF738Q8NE65 137 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 SAT2Q96F10 170 aaPredicted RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 SLC50A1Q9BRV3 221 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 MFFQ9GZY8 342 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 MED28Q9H204 178 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 HRH4Q9H3N8 390 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 ZNF331Q9NQX6 463 aaPredicted RBP6.62□□□□□ -1.35
SYN3-211ENST00000472027 MBD2Q9UBB5 411 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 HSPB11Q9Y547 144 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 NBEAL2Q6ZNJ1 2754 aa6.62□□□□□ -1.35
SYN3-211ENST00000472027 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 NUPR2A6NF83 97 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 H3BTX0 84 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
SYN3-211ENST00000472027 FCN2Q15485 313 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 GUK1Q16774 197 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 GCSAMLQ5JQS6 135 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 ZNF705AQ6ZN79 300 aaPredicted RBP6.61□□□□□ -1.35
SYN3-211ENST00000472027 C1orf158Q8N1D5 194 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 OR11H7Q8NGC8 314 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 OR8A1Q8NGG7 326 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 PHLDA1Q8WV24 401 aaPredicted RBP6.61□□□□□ -1.35
SYN3-211ENST00000472027 NEU1Q99519 415 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 ATP5SQ99766 215 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 SMIM3Q9BZL3 60 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 ZNF586Q9NXT0 402 aa6.61□□□□□ -1.35
SYN3-211ENST00000472027 SMIM9A6NGZ8 99 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
SYN3-211ENST00000472027 C17orf112F2Z3M2 114 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 SLC17A3O00476 420 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 RHOBP62745 196 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 RGS21Q2M5E4 152 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 SCGB1C1Q8TD33 95 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 RPUSD4Q96CM3 377 aaKnown RBP6.6□□□□□ -1.35
SYN3-211ENST00000472027 WFDC1Q9HC57 220 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 TMEM14CQ9P0S9 112 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 KLK5Q9Y337 293 aaPredicted RBP6.6□□□□□ -1.35
SYN3-211ENST00000472027 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
SYN3-211ENST00000472027 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 PRAC2D3DTV9 90 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 M0R2Z0 102 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 CRXO43186 299 aaPredicted RBP6.59□□□□□ -1.35
SYN3-211ENST00000472027 JTBO76095 146 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 IFNA5P01569 189 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 AMBPP02760 352 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 PYYP10082 97 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 HIST1H1EP10412 219 aaKnown RBP6.59□□□□□ -1.35
SYN3-211ENST00000472027 HIST1H1AQ02539 215 aaPredicted RBP6.59□□□□□ -1.35
SYN3-211ENST00000472027 SPINK13Q1W4C9 94 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 MIR17HGQ75NE6 70 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 IGF2BP2-AS1Q96M15 143 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 SLC25A2Q9BXI2 301 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 KCNIP2Q9NS61 270 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 PPP1R14DQ9NXH3 145 aa6.59□□□□□ -1.35
SYN3-211ENST00000472027 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.36
SYN3-211ENST00000472027 STAB2Q8WWQ8 2551 aa6.59□□□□□ -1.36
SYN3-211ENST00000472027 TRBV19A0A075B6N1 114 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 TRAV12-2A0A075B6T6 113 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 ZNF253O75346 499 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 OXA1LQ15070 435 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 Q5BKY6 102 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 FAM167A-AS1Q96KT0 104 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 MRPL32Q9BYC8 188 aaKnown RBP6.58□□□□□ -1.36
SYN3-211ENST00000472027 PARD6GQ9BYG4 376 aaPredicted RBP6.58□□□□□ -1.36
SYN3-211ENST00000472027 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 CELA1Q9UNI1 258 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 TIMM9Q9Y5J7 89 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 RFNGQ9Y644 331 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 RYR2Q92736 4967 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
SYN3-211ENST00000472027 TMEM189A5PLL7 270 aa6.57□□□□□ -1.36
SYN3-211ENST00000472027 C11orf94C9JXX5 98 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms