RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PHYHIPQ92561 330 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 DNAJC30Q96LL9 226 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 DERL3Q96Q80 235 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 CMSS1Q9BQ75 279 aaKnown RBP3.98□□□□□ -1.77
HDAC3-206ENST00000471968 TMEM59Q9BXS4 323 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 SRRQ9GZT4 340 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 MRPL36Q9P0J6 103 aaKnown RBP3.98□□□□□ -1.77
HDAC3-206ENST00000471968 HSPB11Q9Y547 144 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 U3KQ87 197 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 V9GYH0 126 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 A0A0A6YYD4 124 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 TRGV4A0A0C4DH28 118 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 LINC00854A0A1B0GVQ3 168 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 KRBOX1C9JBD0 128 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
HDAC3-206ENST00000471968 M0R2T5 61 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 TNFSF12O43508 249 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 SCGB2A1O75556 95 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 B3GALNT1O75752 331 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 ORM1P02763 201 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 IL4P05112 153 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 MLLT11Q13015 90 aaPredicted RBP3.97□□□□□ -1.77
HDAC3-206ENST00000471968 EIF4EBP1Q13541 118 aaPredicted RBP3.97□□□□□ -1.77
HDAC3-206ENST00000471968 TMEM183BQ1AE95 376 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 HES5Q5TA89 166 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 DGAT2L7PQ6IED9 249 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 DAZ4Q86SG3 579 aaKnown RBP3.97□□□□□ -1.77
HDAC3-206ENST00000471968 TMEM183AQ8IXX5 376 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 SPAG16Q8N0X2 631 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.97□□□□□ -1.77
HDAC3-206ENST00000471968 LGALS14Q8TCE9 139 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 Q8WTZ3 238 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 MAFIPQ8WZ33 124 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 PGLYRP3Q96LB9 341 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 LINC00479Q96M42 142 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 MGLLQ99685 303 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 VGLL1Q99990 258 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 IFT46Q9NQC8 304 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 DAZ3Q9NR90 486 aaKnown RBP3.97□□□□□ -1.77
HDAC3-206ENST00000471968 GSN-AS1Q9NRJ2 163 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 SSR3Q9UNL2 185 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 URGCP-MRPS24S4R325 110 aa3.97□□□□□ -1.77
HDAC3-206ENST00000471968 KMT2DO14686 5537 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 METTL21EPA6NDL7 271 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 GGTLC3B5MD39 225 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 RGS5O15539 181 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 PRSS1P07477 247 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 TGFBR1P36897 503 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 TIRAPP58753 221 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 RAB14P61106 215 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 OR2F1Q13607 317 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 MEF2DQ14814 521 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 P2RY14Q15391 338 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 POU2AF1Q16633 256 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 FAM162BQ5T6X4 162 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 NHLRC2Q8NBF2 726 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 ZNF680Q8NEM1 530 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 OR56B1Q8NGI3 324 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 AP3S1Q92572 193 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 MARVELD1Q9BSK0 173 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 KCNK15Q9H427 330 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 MBD2Q9UBB5 411 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 KCNK7Q9Y2U2 307 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 AK6Q9Y3D8 172 aaKnown RBP3.96□□□□□ -1.78
HDAC3-206ENST00000471968 ALG5Q9Y673 324 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 V9GY05 133 aa3.96□□□□□ -1.78
HDAC3-206ENST00000471968 IGKV1D-13A0A0B4J2D9 117 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 MUC21A0A0G2JKD1 596 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 LOC100506127A0A0U1RQW1 187 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 SCO1O75880 301 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 SCGNO76038 276 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 SNAPINO95295 136 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 DIRAS3O95661 229 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 HPRT1P00492 218 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 UCHL1P09936 223 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 IGKV1-13P0DP09 117 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 ANXA3P12429 323 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 RAB3BP20337 219 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 POLR2GP62487 172 aaKnown RBP eCLIP3.95□□□□□ -1.78
HDAC3-206ENST00000471968 RPS25P62851 125 aaKnown RBP3.95□□□□□ -1.78
HDAC3-206ENST00000471968 RPL19P84098 196 aaKnown RBP3.95□□□□□ -1.78
HDAC3-206ENST00000471968 HIST1H1AQ02539 215 aaPredicted RBP3.95□□□□□ -1.78
HDAC3-206ENST00000471968 ARL6IP1Q15041 203 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 BAK1Q16611 211 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 TRIQKQ629K1 86 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 IGFL4Q6B9Z1 124 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 INO80EQ8NBZ0 244 aaPredicted RBP3.95□□□□□ -1.78
HDAC3-206ENST00000471968 MCUBQ9NWR8 336 aa3.95□□□□□ -1.78
HDAC3-206ENST00000471968 C7orf66A4D0T2 115 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 PCP4L1A6NKN8 68 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 USP17L23D6RBM5 183 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 F8W036 122 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SULT1C2O00338 296 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SLC17A2O00624 439 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 GATCO43716 136 aaKnown RBP3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SPINK4O60575 86 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 ATG12O94817 140 aa3.94□□□□□ -1.78
HDAC3-206ENST00000471968 SFTA3P0C7M3 94 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms