RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CLPSL2Q6UWE3 100 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 WFDC9Q8NEX5 89 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 LRP5O75197 1615 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MARF1Q9Y4F3 1742 aaKnown RBP10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PFN2P35080 140 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C14orf178Q8N769 122 aaPredicted RBP10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MESP1Q9BRJ9 268 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 UBL5Q9BZL1 73 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGKV2D-24A0A075B6R9 120 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 ZNF503Q96F45 646 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PQLC2LA1A4F0 135 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TBX6O95947 436 aaPredicted RBP10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 Q96MF0 132 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SCRT2Q9NQ03 307 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TNFSF13O75888 250 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 WBP1Q96G27 269 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 RALGAPA2Q2PPJ7 1873 aa10.9□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PINLYPA6NC86 204 aa10.9□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ZNF319Q9P2F9 582 aa10.9□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 OVOL1O14753 267 aa10.9□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 EFNA4P52798 201 aa10.9□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 EFNB3Q15768 340 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 F2Z2F3 143 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 DSCR9P59020 149 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IL17RELQ6ZVW7 336 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 PLXNB3Q9ULL4 1909 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 TNRC6BQ9UPQ9 1833 aaKnown RBP10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 D6R8Y8 96 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGHG4P01861 327 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 CD5P06127 495 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 RUSC1-AS1Q66K80 236 aa10.89□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ZNF883P0CG24 379 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 VWC2Q2TAL6 325 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 RTBDNQ9BSG5 229 aaPredicted RBP10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 NDUFB1O75438 58 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 DEFB131AP59861 70 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SP5Q6BEB4 398 aaPredicted RBP10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 A0A0G2JNJ9 132 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 TRACP01848 142 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 RPL23P62829 140 aaKnown RBP10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 Q9UFV3 132 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGHV4-28A0A0C4DH34 117 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 A0A1B0GW15 77 aa10.88□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGKV1OR2-108A0A075B7D4 117 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 DKK1O94907 266 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SMKR1H3BMG3 65 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 LCN12Q6JVE5 192 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 OCC1Q8TAD7 63 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 TM2D1Q9BX74 207 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 PMVKQ15126 192 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ZFHX2Q9C0A1 2572 aaPredicted RBP10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 LRCOL1A6NCL2 159 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 LINC01356Q8N9X3 169 aa10.87□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SAA4P35542 130 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 PRCDQ00LT1 54 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGHV1-3A0A0C4DH29 117 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ANGP03950 147 aaKnown RBP10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 CCL20P78556 96 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 C15orf53Q8NAA6 179 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 BMPERQ8N8U9 685 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 CHAC1Q9BUX1 264 aa10.86□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 NHLRC3Q5JS37 347 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 FAM90A1Q86YD7 464 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 CHCHD1Q96BP2 118 aaKnown RBP10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 SRCAPQ6ZRS2 3230 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 TRBV7-1A0A0A6YYK4 115 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 MCRIP2Q9BUT9 160 aaKnown RBP10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 GAGE12JA6NER3 117 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 FOXG1P55316 489 aaPredicted RBP10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 GAGE1Q13065 139 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 GAGE4Q13068 117 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 GAGE5Q13069 117 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 GAGE6Q13070 117 aa10.85□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ZNF138P52744 262 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 C20orf204Q6ZNR8 217 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 NXPH4O95158 308 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 BUB3O43684 328 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 CFHR2P36980 270 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 LINC00205P59089 165 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 LAMTOR2Q9Y2Q5 125 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 TMEM178BH3BS89 294 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 ANKRD29Q8N6D5 301 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 A6NNC1 897 aa10.84□□□□□ -0.67
NPHP3-ACAD11-201ENST00000471702 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms