RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 KLF5Q13887 457 aaPredicted RBP8.17□□□□□ -1.1
UFD1-206ENST00000466373 ZNF562Q6V9R5 426 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 ZNF414Q96IQ9 312 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 SRSF8Q9BRL6 282 aaKnown RBP8.17□□□□□ -1.1
UFD1-206ENST00000466373 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
UFD1-206ENST00000466373 CSN3P07498 182 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 TMEM11P17152 192 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 MFAP4P55083 255 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 UCNP55089 124 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 NEU4Q8WWR8 484 aaPredicted RBP8.17□□□□□ -1.1
UFD1-206ENST00000466373 UBTD1Q9HAC8 227 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 C21orf62Q9NYP8 219 aa8.17□□□□□ -1.1
UFD1-206ENST00000466373 MUC21A0A0G2JKD1 596 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 MUC21A0A140T8X8 626 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 ARMS2P0C7Q2 107 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 CRIP1P50238 77 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 CT83Q5H943 113 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 MUC21Q5SSG8 566 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 FAM120AOSQ5T036 256 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 LPAR2Q9HBW0 351 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 HOXB4P17483 251 aaPredicted RBP8.16□□□□□ -1.1
UFD1-206ENST00000466373 CTRLP40313 264 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 SPATA12Q7Z6I5 190 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 TXN2Q99757 166 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 WI2-2373I1.2A0A1W2PRP0 233 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 K7EQM0 130 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
UFD1-206ENST00000466373 PSG3Q16557 428 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 TMUB1Q9BVT8 246 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 CSMD2Q7Z408 3487 aa8.16□□□□□ -1.1
UFD1-206ENST00000466373 H0Y8G0 127 aa8.15□□□□□ -1.1
UFD1-206ENST00000466373 TFPI2P48307 235 aa8.15□□□□□ -1.1
UFD1-206ENST00000466373 ECSCRQ19T08 205 aa8.15□□□□□ -1.1
UFD1-206ENST00000466373 CCDC144NLQ6NUI1 221 aa8.15□□□□□ -1.1
UFD1-206ENST00000466373 Q6ZN92 141 aa8.15□□□□□ -1.1
UFD1-206ENST00000466373 MCRIP2Q9BUT9 160 aaKnown RBP8.15□□□□□ -1.1
UFD1-206ENST00000466373 GFRA4Q9GZZ7 299 aa8.15□□□□□ -1.1
UFD1-206ENST00000466373 UTP20O75691 2785 aaKnown RBP8.15□□□□□ -1.11
UFD1-206ENST00000466373 IGKV2-40A0A087WW87 121 aaPredicted RBP8.15□□□□□ -1.11
UFD1-206ENST00000466373 LOC102724200A0A096LPH7 203 aaPredicted RBP8.15□□□□□ -1.11
UFD1-206ENST00000466373 C2orf70A6NJV1 201 aa8.15□□□□□ -1.11
UFD1-206ENST00000466373 IGKV2D-40P01614 121 aaPredicted RBP8.15□□□□□ -1.11
UFD1-206ENST00000466373 BTF3P20290 206 aaKnown RBP8.15□□□□□ -1.11
UFD1-206ENST00000466373 TMEM75Q8N9X5 138 aa8.15□□□□□ -1.11
UFD1-206ENST00000466373 IGHV7-81A0A0B4J1V7 117 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
UFD1-206ENST00000466373 IGLC3P0DOY3 106 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 HLA-DMBP28068 263 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 AAMDCQ9H7C9 122 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 C1RLQ9NZP8 487 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 FLNCQ14315 2725 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 CFAP46Q8IYW2 2715 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.14□□□□□ -1.11
UFD1-206ENST00000466373 IGHV1-24A0A0C4DH33 117 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 A0A1B0GUT8 65 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 ZNF25P17030 456 aaPredicted RBP8.14□□□□□ -1.11
UFD1-206ENST00000466373 NHLH1Q02575 133 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 TTC9CQ8N5M4 171 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 Q8TAT8 98 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 IGHV3OR16-13A0A075B7E8 117 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 TRAV30A0A087WSZ9 112 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 IGHV3-74A0A0B4J1X5 117 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 IGHV3-66A0A0C4DH42 116 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 CTSGP08311 255 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
UFD1-206ENST00000466373 RNF24Q9Y225 148 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 ZFP30Q9Y2G7 519 aa8.14□□□□□ -1.11
UFD1-206ENST00000466373 SOX21Q9Y651 276 aaPredicted RBP8.14□□□□□ -1.11
UFD1-206ENST00000466373 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 OVOL3O00110 214 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 HAX1O00165 279 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 RPLP1P05386 114 aaKnown RBP8.13□□□□□ -1.11
UFD1-206ENST00000466373 LINC00614P0C842 121 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 CT45A10P0DMU9 189 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 GPR183P32249 361 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 Q8N6K4 173 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 THYN1Q9P016 225 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 UQCR10Q9UDW1 63 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 UQCRFS1P47985 274 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 HNRNPA3P51991 378 aaKnown RBP8.13□□□□□ -1.11
UFD1-206ENST00000466373 Q8N9W7 124 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 BPESC1Q9GZL8 116 aa8.13□□□□□ -1.11
UFD1-206ENST00000466373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.12□□□□□ -1.111e-7■■■□□ 18.3
UFD1-206ENST00000466373 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 FAM231BA6NCW3 169 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 LINC01548A6NM66 108 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 CSN1S1P47710 185 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 C15orf32Q32M92 178 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 LYPD1Q8N2G4 141 aa8.12□□□□□ -1.11
UFD1-206ENST00000466373 TMEM70Q9BUB7 260 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms