RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RPL12P30050 165 aaKnown RBP9.39□□□□□ -0.91
COL5A1-206ENST00000465877 SPATA31B1PQ5VZV4 182 aa9.39□□□□□ -0.91
COL5A1-206ENST00000465877 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
COL5A1-206ENST00000465877 CSNK1G2-AS1Q8NCQ2 148 aa9.39□□□□□ -0.91
COL5A1-206ENST00000465877 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
COL5A1-206ENST00000465877 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
COL5A1-206ENST00000465877 RYR2Q92736 4967 aa9.39□□□□□ -0.91
COL5A1-206ENST00000465877 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-206ENST00000465877 SLC17A3O00476 420 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 IGLC2P0DOY2 106 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 OXA1LQ15070 435 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 GCSAMLQ5JQS6 135 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 ZNF709Q8N972 641 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 Q8NAQ8 132 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 ZNF738Q8NE65 137 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 SLC50A1Q9BRV3 221 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
COL5A1-206ENST00000465877 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 A8MTW9 85 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 SNRPCP09234 159 aaKnown RBP9.37□□□□□ -0.91
COL5A1-206ENST00000465877 GIPP09681 153 aaPredicted RBP9.37□□□□□ -0.91
COL5A1-206ENST00000465877 HLA-DMBP28068 263 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 FXYD7P58549 80 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 ASB13Q8WXK3 278 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
COL5A1-206ENST00000465877 X6R8D5 127 aa9.37□□□□□ -0.91
COL5A1-206ENST00000465877 IGHV4-28A0A0C4DH34 117 aa9.36□□□□□ -0.91
COL5A1-206ENST00000465877 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
COL5A1-206ENST00000465877 H3BTX0 84 aa9.36□□□□□ -0.91
COL5A1-206ENST00000465877 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
COL5A1-206ENST00000465877 PSG9Q00887 426 aa9.36□□□□□ -0.91
COL5A1-206ENST00000465877 MFFQ9GZY8 342 aa9.36□□□□□ -0.91
COL5A1-206ENST00000465877 HRH4Q9H3N8 390 aa9.36□□□□□ -0.91
COL5A1-206ENST00000465877 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 H3BQ15 152 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 DEFB4AO15263 64 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
COL5A1-206ENST00000465877 IFNA5P01569 189 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
COL5A1-206ENST00000465877 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
COL5A1-206ENST00000465877 MIFP14174 115 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 PSG3Q16557 428 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
COL5A1-206ENST00000465877 PYYP10082 97 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 PRB4P10163 310 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-206ENST00000465877 HIST1H1AQ02539 215 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-206ENST00000465877 GUK1Q16774 197 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 MIR17HGQ75NE6 70 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 OR8A1Q8NGG7 326 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 SAT2Q96F10 170 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-206ENST00000465877 AQP10Q96PS8 301 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 MRPL32Q9BYC8 188 aaKnown RBP9.34□□□□□ -0.91
COL5A1-206ENST00000465877 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-206ENST00000465877 WFDC1Q9HC57 220 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
COL5A1-206ENST00000465877 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 BOLA2-SMG1P6H3BVE0 249 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 ZNF253O75346 499 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
COL5A1-206ENST00000465877 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
COL5A1-206ENST00000465877 SPINK13Q1W4C9 94 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 FFAR4Q5NUL3 377 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 ZNF705AQ6ZN79 300 aaPredicted RBP9.33□□□□□ -0.92
COL5A1-206ENST00000465877 SCGB1C1Q8TD33 95 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 RPUSD4Q96CM3 377 aaKnown RBP9.33□□□□□ -0.92
COL5A1-206ENST00000465877 ZNF586Q9NXT0 402 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 FUT9Q9Y231 359 aa9.33□□□□□ -0.92
COL5A1-206ENST00000465877 TRBV19A0A075B6N1 114 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 ZNF705FA8MVS1 300 aaPredicted RBP9.32□□□□□ -0.92
COL5A1-206ENST00000465877 M0R2Z0 102 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 PDE6HQ13956 83 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 ZNF266Q14584 549 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 Q5BKY6 102 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 OR2T35Q8NGX2 323 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 C11orf45Q8TAV5 145 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 FAM167A-AS1Q96KT0 104 aa9.32□□□□□ -0.92
COL5A1-206ENST00000465877 FXYD6-FXYD2A0A087WZ82 144 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 RNF222A6NCQ9 220 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 G3V3Q6 166 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 INSP01308 110 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 AMBPP02760 352 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 HIST1H1EP10412 219 aaKnown RBP9.31□□□□□ -0.92
COL5A1-206ENST00000465877 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
COL5A1-206ENST00000465877 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 BLNKQ8WV28 456 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 IGF2BP2-AS1Q96M15 143 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 NEU1Q99519 415 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
COL5A1-206ENST00000465877 HYDINQ4G0P3 5121 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 PRAC2D3DTV9 90 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 CRXO43186 299 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms