RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 HILPDAQ9Y5L2 63 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 INSIG2Q9Y5U4 225 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 PDZD2O15018 2839 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 RPS16P62249 146 aaKnown RBP9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 RBPMS2Q6ZRY4 209 aaKnown RBP9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 SSMEM1Q8WWF3 244 aa9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 SSBP3Q9BWW4 388 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC3-205ENST00000462715 CSMD1Q96PZ7 3565 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 TRBV7-9A0A0J9YWB2 115 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 IQCF6A8MYZ5 107 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 J3QT63 122 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 MGST3O14880 152 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 FCGR2BP31994 310 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 ALKBH6Q3KRA9 238 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 LRRC75A-AS1Q8N1F1 130 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 AMMECR1Q9Y4X0 333 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 OOEPA6NGQ2 149 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 SPINK8P0C7L1 97 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 KIR2DS2P43631 304 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 ATP5J2P56134 94 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 GAGE13Q4V321 117 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 GCM1Q9NP62 436 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
TRAPPC3-205ENST00000462715 C17orf100A8MU93 164 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 PEX7O00628 323 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 CHEK1O14757 476 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 FOXE3Q13461 319 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 WFDC2Q14508 124 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 COQ2Q96H96 371 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
TRAPPC3-205ENST00000462715 TMEM30CPA0ZSE6 113 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 SRRM4A7MD48 611 aaKnown RBP9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 EFNA4P52798 201 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 TRAT1Q6PIZ9 186 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 FOXC2Q99958 501 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 SLC25A33Q9BSK2 321 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 TMEM133Q9H2Q1 129 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 PRO0461Q9UI25 63 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 ARFGEF3Q5TH69 2177 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 CA6P23280 308 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 ERVK-16P61578 105 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 ZNF146Q15072 292 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 Q6ZR03 302 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 TEX15Q9BXT5 2789 aa9.17□□□□□ -0.94
TRAPPC3-205ENST00000462715 H3BMG7 143 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 SPRY3O43610 288 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 PRSS12P56730 875 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 SHISA2Q6UWI4 295 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 ZCCHC24Q8N2G6 241 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 USF3Q68DE3 2245 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 C19orf71A6NCJ1 209 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 IGLL5B9A064 214 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 IGHV1-46P01743 117 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 IGHV4-39P01824 125 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 FOXI1Q12951 378 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 RNF183Q96D59 192 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 MLST8Q9BVC4 326 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 POLDIP2Q9Y2S7 368 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 TNFRSF18Q9Y5U5 241 aa9.16□□□□□ -0.94
TRAPPC3-205ENST00000462715 OR2H2O95918 312 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 TNFAIP6P98066 277 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 MZT1Q08AG7 82 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 CR1LQ2VPA4 569 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 ZNF329Q86UD4 541 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 TCF19Q9Y242 345 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 NPIPB6E9PJ23 425 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 LINC01619G3V211 115 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 SNAI2O43623 268 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 CCL8P80075 99 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 SPINK9Q5DT21 86 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 BCL6BQ8N143 479 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 ZNF714Q96N38 554 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 ANAPC13Q9BS18 74 aa9.15□□□□□ -0.94
TRAPPC3-205ENST00000462715 TCRBV4S1A1TA0A5B7 111 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 J3KRW8 73 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 NDUFS7O75251 213 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 APOHP02749 345 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 TNFRSF1AP19438 455 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 DSCR9P59020 149 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 ETDBQ3ZM63 59 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 TMEM177Q53S58 311 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 Q6ZUT4 128 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 CEND1Q8N111 149 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 OR5AN1Q8NGI8 311 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 CXXC4Q9H2H0 198 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 ENY2Q9NPA8 101 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 SS18L2Q9UHA2 77 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 FOXA2Q9Y261 457 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 MAP1AP78559 2803 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 P01737 135 aa9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 SLC25A48Q6ZT89 311 aaKnown RBP9.14□□□□□ -0.95
TRAPPC3-205ENST00000462715 FAM167A-AS1Q96KT0 104 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms