RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 SLC35B3Q9H1N7 401 aa13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 X6R8D5 127 aa13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 TRAV5A0A0B4J249 113 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 DUSP14O95147 198 aaKnown RBP13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 HLA-DMBP28068 263 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 NANOS2P60321 138 aaKnown RBP13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 CHAC2Q8WUX2 184 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 RNF126Q9BV68 326 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 MFFQ9GZY8 342 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 TENM2Q9NT68 2774 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
CDKN1A-206ENST00000462537 IGHV3OR16-12A0A075B7B8 117 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 LCE6AA0A183 80 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 H3BTX0 84 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 JTBO76095 146 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 CXCL2P19875 107 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 CXCL3P19876 107 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 CNN1P51911 297 aaKnown RBP13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 SLC50A1Q9BRV3 221 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 MED28Q9H204 178 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 HSPB11Q9Y547 144 aa13.42□□□□□ -0.26
CDKN1A-206ENST00000462537 RBMY1A1P0DJD3 496 aaKnown RBP13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 RBMY1CP0DJD4 496 aa13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 RPL12P30050 165 aaKnown RBP13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 HIST1H1AQ02539 215 aaPredicted RBP13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 RBMY1FQ15415 496 aaKnown RBP13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 PSG3Q16557 428 aa13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 CEMP1Q6PRD7 247 aaPredicted RBP13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 ATP5SQ99766 215 aa13.41□□□□□ -0.26
CDKN1A-206ENST00000462537 PRB4P10163 310 aaPredicted RBP13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 PHLDA1Q8WV24 401 aaPredicted RBP13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 SMIM3Q9BZL3 60 aa13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 WDR61Q9GZS3 305 aaKnown RBP13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 ZNF331Q9NQX6 463 aaPredicted RBP13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 KCNIP2Q9NS61 270 aa13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 PPP1R14DQ9NXH3 145 aa13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 KLK5Q9Y337 293 aaPredicted RBP13.4□□□□□ -0.26
CDKN1A-206ENST00000462537 C17orf112F2Z3M2 114 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 SLC17A3O00476 420 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 IGLC2P0DOY2 106 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 FCN2Q15485 313 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 GCSAMLQ5JQS6 135 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 OR11H7Q8NGC8 314 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 HRH4Q9H3N8 390 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 GOLT1BQ9Y3E0 138 aa13.39□□□□□ -0.27
CDKN1A-206ENST00000462537 A8MTW9 85 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 H3BQ15 152 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 IFNA5P01569 189 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 RHOBP62745 196 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 GUK1Q16774 197 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 AMTNQ6UX39 209 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 ZNF705AQ6ZN79 300 aaPredicted RBP13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 OR8A1Q8NGG7 326 aa13.38□□□□□ -0.27
CDKN1A-206ENST00000462537 M0R2Z0 102 aa13.37□□□□□ -0.27
CDKN1A-206ENST00000462537 AMBPP02760 352 aa13.37□□□□□ -0.27
CDKN1A-206ENST00000462537 SPINK13Q1W4C9 94 aa13.37□□□□□ -0.27
CDKN1A-206ENST00000462537 RGS21Q2M5E4 152 aa13.37□□□□□ -0.27
CDKN1A-206ENST00000462537 SCGB1C1Q8TD33 95 aa13.37□□□□□ -0.27
CDKN1A-206ENST00000462537 TMEM208Q9BTX3 173 aa13.37□□□□□ -0.27
CDKN1A-206ENST00000462537 SMIM9A6NGZ8 99 aa13.36□□□□□ -0.27
CDKN1A-206ENST00000462537 ZNF705FA8MVS1 300 aaPredicted RBP13.36□□□□□ -0.27
CDKN1A-206ENST00000462537 NEU1Q99519 415 aa13.36□□□□□ -0.27
CDKN1A-206ENST00000462537 ZNF586Q9NXT0 402 aa13.36□□□□□ -0.27
CDKN1A-206ENST00000462537 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 INSP01308 110 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 PYYP10082 97 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 EMP1P54849 157 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 SAT2Q96F10 170 aaPredicted RBP13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 IGF2BP2-AS1Q96M15 143 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 LYSTQ99698 3801 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 TMEM14CQ9P0S9 112 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 CELA1Q9UNI1 258 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 RFNGQ9Y644 331 aa13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 DYNC2H1Q8NCM8 4307 aaKnown RBP13.35□□□□□ -0.27
CDKN1A-206ENST00000462537 HBE1P02100 147 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 MIR17HGQ75NE6 70 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 BAP18Q8IXM2 172 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 C1orf158Q8N1D5 194 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 OR10J6PQ8NGY7 276 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 BLNKQ8WV28 456 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 SLC25A2Q9BXI2 301 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 MRPL32Q9BYC8 188 aaKnown RBP13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 TIMM9Q9Y5J7 89 aa13.34□□□□□ -0.27
CDKN1A-206ENST00000462537 RYR3Q15413 4870 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 TRBV19A0A075B6N1 114 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 TRAV12-2A0A075B6T6 113 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 TMEM189A5PLL7 270 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 ZNF253O75346 499 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 HIST1H1EP10412 219 aaKnown RBP13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 FFAR4Q5NUL3 377 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 FUT9Q9Y231 359 aa13.33□□□□□ -0.28
CDKN1A-206ENST00000462537 C11orf94C9JXX5 98 aa13.32□□□□□ -0.28
CDKN1A-206ENST00000462537 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
CDKN1A-206ENST00000462537 RRN3P1Q2M238 152 aa13.32□□□□□ -0.28
CDKN1A-206ENST00000462537 Q6ZTC4 211 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms