RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 DOCK9Q9BZ29 2069 aa3.89□□□□□ -1.79
EPHA3-202ENST00000452448 TRIP12Q14669 1992 aaPredicted RBP3.89□□□□□ -1.79
EPHA3-202ENST00000452448 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 PGPA6NDG6 321 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 J3QT63 122 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 SCGB1C2P0DMR2 95 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 RPS11P62280 158 aaKnown RBP eCLIP3.88□□□□□ -1.79
EPHA3-202ENST00000452448 CFHR3Q02985 330 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
EPHA3-202ENST00000452448 FGF11Q92914 225 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 TAAR2Q9P1P5 351 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 TRBV5-7A0A0A0MS05 114 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 A0A1B0GXF2 115 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 LYRM9A8MSI8 78 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 LGALS9O00182 355 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 PRRG2O14669 202 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 CD70P32970 193 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 EFNA4P52798 201 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 CACNG7P62955 275 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 FAM57BQ71RH2 274 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 C6orf201Q7Z4U5 140 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 LRRC29Q8WV35 223 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 EPDR1Q9UM22 224 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 DYSFO75923 2080 aa3.88□□□□□ -1.79
EPHA3-202ENST00000452448 COL4A6Q14031 1691 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 TRBV19A0A075B6N1 114 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 LINC01548A6NM66 108 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 NDUFC2-KCTD14E9PQ53 114 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 MGST3O14880 152 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 MRPS12O15235 138 aaKnown RBP3.87□□□□□ -1.79
EPHA3-202ENST00000452448 SBSPONQ8IVN8 264 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 MORN4Q8NDC4 146 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 H1FXQ92522 213 aaKnown RBP3.87□□□□□ -1.79
EPHA3-202ENST00000452448 TM2D3Q9BRN9 247 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 LINC00597Q9H2U6 94 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 HMGN4O00479 90 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 TIMM23O14925 209 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 RNASE1P07998 156 aaKnown RBP3.87□□□□□ -1.79
EPHA3-202ENST00000452448 ERCC8Q13216 396 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 LAGE3Q14657 143 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 MIC13Q5XKP0 118 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 PAXXQ9BUH6 204 aa3.87□□□□□ -1.79
EPHA3-202ENST00000452448 TRAV17A0A0B4J275 112 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 ATOX1O00244 68 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
EPHA3-202ENST00000452448 HLA-DQA1P01909 254 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 PSMB2P49721 201 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 FXYD6P3P58550 94 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 ZNF56Q15929 161 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 LGALS9CQ6DKI2 356 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 PVRIGQ6DKI7 326 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 RPP25LQ8N5L8 163 aaKnown RBP3.86□□□□□ -1.79
EPHA3-202ENST00000452448 PRSS27Q9BQR3 290 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 KIAA1671Q9BY89 1806 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 ZNF286AQ9HBT8 521 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 TRGV5A0A0B4J1U4 118 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 C16orf97H3BN30 126 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 H3BVH4 76 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 MGST1P10620 155 aaKnown RBP3.86□□□□□ -1.79
EPHA3-202ENST00000452448 SLC25A16P16260 332 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 TMEM155Q4W5P6 130 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 WDR38Q5JTN6 314 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 MYOZ3Q8TDC0 251 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 PGLYRP4Q96LB8 373 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 ARRDC1-AS1Q9H2J1 176 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 V9GY05 133 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 POLEQ07864 2286 aa3.86□□□□□ -1.79
EPHA3-202ENST00000452448 TRPM6Q9BX84 2022 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 SSSCA1O60232 199 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 NDUFS7O75251 213 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 IGHG2P01859 326 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 HLA-DOBP13765 273 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 UBE2L3P68036 154 aaKnown RBP3.85□□□□□ -1.79
EPHA3-202ENST00000452448 TFF2Q03403 129 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 FAM120AOSQ5T036 256 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 C6orf223Q8N319 242 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 ZNF645Q8N7E2 425 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 TMEM158Q8WZ71 300 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 METTL26Q96S19 204 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 IL36BQ9NZH7 164 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 MOB4Q9Y3A3 225 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 KIAA2026Q5HYC2 2103 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 PHF3Q92576 2039 aaKnown RBP3.85□□□□□ -1.79
EPHA3-202ENST00000452448 TRAV41A0A0B4J266 112 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 LEPROTL1O95214 131 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 RBMY1CP0DJD4 496 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 COX5AP20674 150 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 COL8A2P25067 703 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 GCHFRP30047 84 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 FAM222AQ5U5X8 452 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 LINC01545Q5VT33 79 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 C1orf140Q5VVS0 124 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 OR5AS1Q8N127 324 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 CD177Q8N6Q3 437 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 OR8A1Q8NGG7 326 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 OVOL2Q9BRP0 275 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 UPK3BQ9BT76 320 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms