RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 HIST1H2BCP62807 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 AKR1C1Q04828 323 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 SMAGPQ0VAQ4 97 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 RHEBQ15382 184 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 VAMP3Q15836 100 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 PRSS8Q16651 343 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST2H2BEQ16778 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 PAGE3Q5JUK9 113 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 CST9LP1Q5W188 147 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 C22orf42Q6IC83 251 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 Q6P435 159 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 SLC25A26Q70HW3 274 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 CSNK1G2-AS1Q8NCQ2 148 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 OR1P1Q8NH06 330 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BHQ93079 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 GALMQ96C23 342 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 PHYHIPLQ96FC7 376 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 DIRAS2Q96HU8 199 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 YPEL4Q96NS1 127 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BNQ99877 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BMQ99879 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 CHAC1Q9BUX1 264 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 ABHD6Q9BV23 337 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 MRPL20Q9BYC9 149 aaKnown RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 ARL6Q9H0F7 186 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 EXOSC4Q9NPD3 245 aaKnown RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM14BQ9NUH8 114 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 MRPL27Q9P0M9 148 aaKnown RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 ORC6Q9Y5N6 252 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 IGKV3-7A0A075B6H7 116 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 IGHV3-43A0A0B4J1X8 118 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 C7orf77A4D0Y5 90 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 OR4C46A6NHA9 309 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 C15orf65H3BRN8 121 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 SLC17A3O00476 420 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 MT-ND4P03905 459 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 SERPINE2P07093 398 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 CTSDP07339 412 aaPredicted RBP3.23□□□□□ -1.89
SDCBP-205ENST00000447267 SFTA3P0C7M3 94 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 IGHV3-43DP0DP04 118 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 MGMTP16455 207 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 OR10J1P30954 320 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PAX9P55771 341 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PIGPP57054 158 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PAFAH1B2P68402 229 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 ATP5G2Q06055 141 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PJVKQ0ZLH3 352 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 GAGE5Q13069 117 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 GAGE6Q13070 117 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 UBE2V2Q15819 145 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 MRPL23Q16540 153 aaKnown RBP3.23□□□□□ -1.89
SDCBP-205ENST00000447267 ESRGQ1W209 222 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM128Q5BJH2 165 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 CT45A1Q5HYN5 189 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 FAM71F2Q6NXP2 309 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 RPL22L1Q6P5R6 122 aaKnown RBP3.23□□□□□ -1.89
SDCBP-205ENST00000447267 RNASEKQ6P5S7 137 aaKnown RBP3.23□□□□□ -1.89
SDCBP-205ENST00000447267 UNQ9165/PRO28630Q6UXU0 137 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 ZNF730Q6ZMV8 503 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 NIT1Q86X76 327 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 GPHB5Q86YW7 130 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM183AQ8IXX5 376 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 Q8IYB0 196 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 OR8I2Q8N0Y5 310 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 FAM24BQ8N5W8 94 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 STPG4Q8N801 248 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 ADAD2Q8NCV1 583 aaKnown RBP3.23□□□□□ -1.89
SDCBP-205ENST00000447267 OR51T1Q8NGJ9 327 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 CT45A3Q8NHU0 189 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 CNIH3Q8TBE1 160 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PTX4Q96A99 478 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 ISOC2Q96AB3 205 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 MOB3AQ96BX8 217 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PYURFQ96I23 114 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 SOSTQ9BQB4 213 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 C5orf66Q9H5L9 145 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 GPR84Q9NQS5 396 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 SDR39U1Q9NRG7 319 aaPredicted RBP3.23□□□□□ -1.89
SDCBP-205ENST00000447267 FAM206AQ9NX38 181 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 OR5AC2Q9NZP5 309 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 PIPOXQ9P0Z9 390 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 CACNG5Q9UF02 275 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 CACFD1Q9UGQ2 172 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 IKZF2Q9UKS7 526 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 ENPP4Q9Y6X5 453 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 S4R3C0 116 aa3.23□□□□□ -1.89
SDCBP-205ENST00000447267 NEBP20929 6669 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 TRAV8-7A0A075B6U6 113 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 SAA2-SAA4A0A096LPE2 208 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 LOC100130705A0A1B0GUX0 176 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM235A6NFC5 223 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 SMIM9A6NGZ8 99 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 A6NIN4 97 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 MFNGO00587 321 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 SH2D1BO14796 132 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 AGPAT2O15120 278 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 SYT7O43581 403 aa3.22□□□□□ -1.89
SDCBP-205ENST00000447267 PRAF2O60831 178 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms