RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ENY2Q9NPA8 101 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 CCL28Q9NRJ3 127 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPANXB1Q9NS25 103 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 MED29Q9NX70 200 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SS18L2Q9UHA2 77 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF835Q9Y2P0 537 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 MED12LQ86YW9 2145 aa3.34□□□□□ -1.88
HMGB1P16-201ENST00000447155 A8MWL6 223 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 K7EN84 100 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 SNCGO76070 127 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHV3-7P01780 117 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CYBAP13498 195 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 GABRG2P18507 467 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 KIR2DS2P43631 304 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 EDDM3BP56851 147 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPL32P62910 135 aaKnown RBP3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 SLC35B1P78383 322 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 PSG7Q13046 419 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 RUNX3Q13761 415 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 TAL2Q16559 108 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 POU2AF1Q16633 256 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 LGALS9BQ3B8N2 356 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 GCSAMLQ5JQS6 135 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CARD17Q5XLA6 110 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 TMEM42Q69YG0 159 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q6AWC8 147 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 LGALS9CQ6DKI2 356 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 C2orf91Q6ZV80 131 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q8IYB0 196 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 BOD1L2Q8IYS8 172 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZADH2Q8N4Q0 377 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 OR10X1Q8NGY0 326 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CT55Q8WUE5 264 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 OXGR1Q96P68 337 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CDX2Q99626 313 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 HINT2Q9BX68 163 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 NXF5Q9H1B4 397 aaKnown RBP3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 MAP1LC3AQ9H492 121 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 DEC1Q9P2X7 70 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 PSG8Q9UQ74 426 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A0G2JRQ6 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 CENPVL3A0A0U1RRI6 287 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1W2PRD5 423 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1W2PRF3 423 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1W2PRM7 423 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 HIGD1CA8MV81 97 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 H3BMG7 143 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 FCN3O75636 299 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-5P01602 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 NPPCP23582 126 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ASIPP42127 132 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 DSCR10P59022 87 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPL30P62888 115 aaKnown RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 UBE2L3P68036 154 aaKnown RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 FXYD3Q14802 87 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 CST6Q15828 149 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 CEACAM21Q3KPI0 293 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 C5orf47Q569G3 176 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 FAM120AOSQ5T036 256 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q6ZUT4 128 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPRMLQ8N4K4 120 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 PPDPFLQ8WWR9 84 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RLN3Q8WXF3 142 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RAB37Q96AX2 223 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ELSPBP1Q96BH3 223 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF414Q96IQ9 312 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 TPPP3Q9BW30 176 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RAB1BQ9H0U4 201 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 HILPDAQ9Y5L2 63 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 PCDH15Q96QU1 1955 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 AGRNO00468 2067 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 C2orf16Q68DN1 1984 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1D-43A0A0B4J1Z2 117 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPAARA0A1B0GVQ0 90 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1B0GWB2 263 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1B0GXF2 115 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SLC31A1O15431 190 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 DUX1O43812 170 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPINK4O60575 86 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 P01737 135 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHG4P01861 327 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 CLPSP04118 112 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 NMUP48645 174 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPL8P62917 257 aaKnown RBP3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 GNG3P63215 75 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 MEF2CQ06413 473 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PSG5Q15238 335 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 GUSBP1Q15486 140 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PRR22Q8IZ63 422 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PIFOQ8TCI5 191 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 LRRC29Q8WV35 223 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms