RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ASIPP42127 132 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 KIR2DS2P43631 304 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 SPINT3P49223 89 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 EMDP50402 254 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ZNF138P52744 262 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 RPL27P61353 136 aaKnown RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 HERVK_113P61574 105 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 HSPE1P61604 102 aaKnown RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 PMVKQ15126 192 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 KISS1Q15726 138 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ARTNQ5T4W7 220 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 H2BFWTQ7Z2G1 175 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 CIARTQ8N365 385 aaPredicted RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 RDH5Q92781 318 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TM4SF19Q96DZ7 209 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 LINC00477Q96M19 166 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 NABP2Q9BQ15 211 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 CHCHD5Q9BSY4 110 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 SPRY4Q9C004 299 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 OSTCQ9NRP0 149 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 C21orf62Q9NYP8 219 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 HCFC1P51610 2035 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 A0A1W2PRX2 142 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 OOSP1A8MZH6 123 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 RS1O15537 224 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 NDUFA7O95182 113 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 APOHP02749 345 aaPredicted RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 PRSS1P07477 247 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 NHLRC4P0CG21 123 aaPredicted RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 PRDX1Q06830 199 aaKnown RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 TFF3Q07654 80 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 CDSNQ15517 529 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TMEM219Q86XT9 240 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 DTX1Q86Y01 620 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 PCP2Q8IVA1 136 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ZNF645Q8N7E2 425 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 NUP35Q8NFH5 326 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TMEM101Q96IK0 257 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 C1RLQ9NZP8 487 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 V9GYV3 84 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TRBV20OR9-2A0A075B6H5 130 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 LOC389332A0A1B0GUA5 103 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 FAM236AA0A1B0GUQ0 79 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 FAM236BA0A1B0GV22 79 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 E9PLD3 99 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 HOXA3O43365 443 aaPredicted RBP2.26□□□□□ -2.05
LIG4-203ENST00000442234 MPDU1O75352 247 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 MYOD1P15172 320 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 CTLA4P16410 223 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 SRD5A1P18405 259 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 HBBP68871 147 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 Q1RN00 199 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 RRN3P1Q2M238 152 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 BORCS8Q96FH0 119 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 CYYR1Q96J86 154 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 LINC00479Q96M42 142 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 SIRPDQ9H106 197 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 CCL28Q9NRJ3 127 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 NLRC5Q86WI3 1866 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 NCKAP5O14513 1909 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 HIGD1CA8MV81 97 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 HSPB6O14558 160 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 NDUFS7O75251 213 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 P04436 131 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 CA6P23280 308 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 ARL16Q0P5N6 197 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 ZNF56Q15929 161 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 C12orf74Q32Q52 190 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 ZNF658BQ4V348 819 aaPredicted RBP2.26□□□□□ -2.05
LIG4-203ENST00000442234 SCGB1D4Q6XE38 83 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 ZNF793Q6ZN11 406 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 RPS19BP1Q86WX3 136 aaKnown RBP2.26□□□□□ -2.05
LIG4-203ENST00000442234 OR9G1Q8NH87 305 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 ZNF488Q96MN9 340 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 NPCDR1Q9BY65 106 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 PRTFDC1Q9NRG1 225 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 IL36RNQ9UBH0 155 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 PRNDQ9UKY0 176 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 A0A0A6YYD5 115 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 A0A0U1RQV1 116 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 TCRBV4S1A1TA0A5B7 111 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 C9JCJ5 164 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 NPIPB6E9PJ23 425 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 CLDN14O95500 239 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 TRACP01848 142 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 RBP4P02753 201 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 FOXG1P55316 489 aaPredicted RBP2.26□□□□□ -2.05
LIG4-203ENST00000442234 DLX6P56179 175 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 UTF1Q5T230 341 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 C1orf195Q5TG92 126 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 LINC01545Q5VT33 79 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 SLC35E4Q6ICL7 350 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 CEND1Q8N111 149 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 SSMEM1Q8WWF3 244 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 AAMDCQ9H7C9 122 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 SPANXCQ9NY87 97 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 PROCRQ9UNN8 238 aa2.26□□□□□ -2.05
LIG4-203ENST00000442234 KLK5Q9Y337 293 aaPredicted RBP2.26□□□□□ -2.05
LIG4-203ENST00000442234 ZNF106Q9H2Y7 1883 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms