RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 KLK5Q9Y337 293 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 HLA-DRB4X5D2U9 266 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 FLNBO75369 2602 aaKnown RBP3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 NUP205Q92621 2012 aa3.65□□□□□ -1.83
HMGB3P9-201ENST00000441799 TMEM131Q92545 1883 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 BPTFQ12830 3046 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 IGLV3-10A0A075B6K4 115 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRBV5-5A0A0J9YX44 114 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 IRGMA1A4Y4 181 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 F6UB75 175 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 LGALS9O00182 355 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 NDUFS5O43920 106 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 SS18L1O75177 396 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZNF324O75467 553 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 SRSF10O75494 262 aaKnown RBP3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 SERF1AO75920 110 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 SMIM13P0DJ93 91 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 COX8AP10176 69 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 COX6A1P12074 109 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 MRPS36P82909 103 aaKnown RBP3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 CFHR3Q02985 330 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 FAM78AQ5JUQ0 283 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 TMEM136Q6ZRR5 245 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 DNM1P46Q6ZS02 220 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 C2orf91Q6ZV80 131 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 BPIFA4PQ86YQ2 179 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 SFTPA1Q8IWL2 248 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 AMN1Q8IY45 258 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 PRSS33Q8NF86 280 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 OR10G2Q8NGC3 310 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 OR8B3Q8NGG8 313 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 PPP1R1CQ8WVI7 109 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 IL1F10Q8WWZ1 152 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 KCNS1Q96KK3 526 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 OR2A5Q96R48 311 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 OR8B2Q96RD0 313 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 NMES1Q9C002 83 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 SLC39A9Q9NUM3 307 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 ABRACLQ9P1F3 81 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 C19orf25Q9UFG5 118 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRAPPC1Q9Y5R8 145 aa3.64□□□□□ -1.83
HMGB3P9-201ENST00000441799 ASH1LQ9NR48 2969 aaKnown RBP3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 ACACBO00763 2458 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 KIF26AQ9ULI4 1882 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 hDV102S1A0JD36 115 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 SYNGR2O43760 224 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 NXPH3O95157 252 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 WISP3O95389 354 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 PPP1R3DO95685 299 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 TCRAP04437 139 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 HLA-DPB1P04440 258 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 NPC2P61916 151 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 HOXA4Q00056 320 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 PSMG4Q5JS54 123 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 PAPPA-AS1Q5QFB9 102 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 FAM222AQ5U5X8 452 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 CXCL17Q6UXB2 119 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 CEND1Q8N111 149 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 RPP25LQ8N5L8 163 aaKnown RBP3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 C3orf56Q8N813 242 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 WFDC11Q8NEX6 87 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 FAM213BQ8TBF2 198 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 TMEM158Q8WZ71 300 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 CCL17Q92583 94 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 SLC25A38Q96DW6 304 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 OVOL2Q9BRP0 275 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 CHCHD5Q9BSY4 110 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 DPH3P1Q9H4G8 78 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 Q9HAA7 133 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 TSC2P49815 1807 aa3.63□□□□□ -1.83
HMGB3P9-201ENST00000441799 MYO16Q9Y6X6 1858 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZZEF1O43149 2961 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 SPEGQ15772 3267 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 TRBV5-7A0A0A0MS05 114 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 ZFP92A6NM28 416 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 K7EM74 188 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 ATOX1O00244 68 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 SDCBPO00560 298 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 OR1I1O60431 355 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 SLC25A14O95258 325 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 CPSF4O95639 269 aaKnown RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 TCL1BO95988 128 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 IGKCP01834 107 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 CD7P09564 240 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 DAPP51397 102 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 SSBP1Q04837 148 aaKnown RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 TMEM187Q14656 261 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 SPANXN4Q5MJ08 99 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 CYP2G1PQ6ZSU1 146 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 ATP5L2Q7Z4Y8 100 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 OR5AS1Q8N127 324 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 PHLDA1Q8WV24 401 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 RITA1Q96K30 269 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 DSCR8Q96T75 97 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 CLEC7AQ9BXN2 247 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 OCIAD1Q9NX40 245 aa3.62□□□□□ -1.83
HMGB3P9-201ENST00000441799 HHLA3Q9XRX5 114 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms