RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 HLA-DMBP28068 263 aa14.95□□□□□ -0.02
HSPG2-205ENST00000427897 C10orf113Q5VZT2 155 aa14.95□□□□□ -0.02
HSPG2-205ENST00000427897 RNF182Q8N6D2 247 aa14.95□□□□□ -0.02
HSPG2-205ENST00000427897 MGST2Q99735 147 aa14.95□□□□□ -0.02
HSPG2-205ENST00000427897 TMEM208Q9BTX3 173 aa14.95□□□□□ -0.02
HSPG2-205ENST00000427897 SMIM9A6NGZ8 99 aa14.94□□□□□ -0.02
HSPG2-205ENST00000427897 RPL12P30050 165 aaKnown RBP14.94□□□□□ -0.02
HSPG2-205ENST00000427897 PATE2Q6UY27 113 aa14.94□□□□□ -0.02
HSPG2-205ENST00000427897 BPIFA4PQ86YQ2 179 aa14.94□□□□□ -0.02
HSPG2-205ENST00000427897 OR1L4Q8NGR5 311 aa14.94□□□□□ -0.02
HSPG2-205ENST00000427897 UBE2L5PA0A1B0GUS4 154 aa14.93□□□□□ -0.02
HSPG2-205ENST00000427897 IGLL5B9A064 214 aa14.93□□□□□ -0.02
HSPG2-205ENST00000427897 EMP1P54849 157 aa14.93□□□□□ -0.02
HSPG2-205ENST00000427897 RHOBP62745 196 aa14.93□□□□□ -0.02
HSPG2-205ENST00000427897 DNAJC4Q9NNZ3 241 aa14.93□□□□□ -0.02
HSPG2-205ENST00000427897 TMEM189A5PLL7 270 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 AMBPP02760 352 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 NHLH2Q02577 135 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 VWC2Q2TAL6 325 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 OR5C1Q8NGR4 320 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 CHAC2Q8WUX2 184 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 PFDN5Q99471 154 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 NEU1Q99519 415 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 HSPB11Q9Y547 144 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 RFNGQ9Y644 331 aa14.92□□□□□ -0.02
HSPG2-205ENST00000427897 A0A087X0K7 114 aa14.91□□□□□ -0.02
HSPG2-205ENST00000427897 TRAV10A0A0B4J240 114 aa14.91□□□□□ -0.02
HSPG2-205ENST00000427897 ZNF705DP0CH99 300 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-205ENST00000427897 ZNF705BP0CI00 300 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-205ENST00000427897 CNN1P51911 297 aaKnown RBP14.91□□□□□ -0.02
HSPG2-205ENST00000427897 MIC13Q5XKP0 118 aa14.91□□□□□ -0.02
HSPG2-205ENST00000427897 ZNF705AQ6ZN79 300 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-205ENST00000427897 ZNF709Q8N972 641 aa14.91□□□□□ -0.02
HSPG2-205ENST00000427897 C17orf77Q96MU5 243 aa14.91□□□□□ -0.02
HSPG2-205ENST00000427897 WDR83OSQ9Y284 106 aa14.91□□□□□ -0.02
HSPG2-205ENST00000427897 FXYD6-FXYD2A0A087WZ82 144 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 TRAV8-2A0A0B4J237 113 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 HBE1P02100 147 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 FGF7P21781 194 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 TCTAP57738 103 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 HIST1H1AQ02539 215 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-205ENST00000427897 PSG3Q16557 428 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 LCN15Q6UWW0 184 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 Q6ZTC4 211 aa14.9□□□□□ -0.02
HSPG2-205ENST00000427897 INO80EQ8NBZ0 244 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-205ENST00000427897 ZNF705FA8MVS1 300 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-205ENST00000427897 MPDU1O75352 247 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 SNRPCP09234 159 aaKnown RBP14.89□□□□□ -0.03
HSPG2-205ENST00000427897 SPART-AS1P0CW21 52 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 Q5BKY6 102 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 ZNF767PQ75MW2 155 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 TMEM37Q8WXS4 190 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 IGF2BP2-AS1Q96M15 143 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 AQP10Q96PS8 301 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 SLC50A1Q9BRV3 221 aa14.89□□□□□ -0.03
HSPG2-205ENST00000427897 CXCL2P19875 107 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 RPL29P47914 159 aaKnown RBP14.88□□□□□ -0.03
HSPG2-205ENST00000427897 B2MP61769 119 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 CLINT1Q14677 625 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 SPINK13Q1W4C9 94 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 RRN3P1Q2M238 152 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 LYSTQ99698 3801 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 ATP5SQ99766 215 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 SLC39A9Q9NUM3 307 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 CELA1Q9UNI1 258 aa14.88□□□□□ -0.03
HSPG2-205ENST00000427897 hCG_2014768A0A024R1R8 64 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 M0R2Z0 102 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 INSP01308 110 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 PRR20EP86478 221 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 PRR20CP86479 221 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 PRR20DP86480 221 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 PRR20BP86481 221 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 PRR20AP86496 221 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 OPCMLQ14982 345 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 OR8A1Q8NGG7 326 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 RPUSD4Q96CM3 377 aaKnown RBP14.87□□□□□ -0.03
HSPG2-205ENST00000427897 PXMP4Q9Y6I8 212 aa14.87□□□□□ -0.03
HSPG2-205ENST00000427897 DYNC2H1Q8NCM8 4307 aaKnown RBP14.87□□□□□ -0.03
HSPG2-205ENST00000427897 DEFB131BA0A096LNP1 70 aa14.86□□□□□ -0.03
HSPG2-205ENST00000427897 TEX48A0A1B0GUV7 120 aa14.86□□□□□ -0.03
HSPG2-205ENST00000427897 LOC102723971A0A1B0GUV8 181 aa14.86□□□□□ -0.03
HSPG2-205ENST00000427897 LGALS9CQ6DKI2 356 aa14.86□□□□□ -0.03
HSPG2-205ENST00000427897 C1orf158Q8N1D5 194 aa14.86□□□□□ -0.03
HSPG2-205ENST00000427897 ZNF331Q9NQX6 463 aaPredicted RBP14.86□□□□□ -0.03
HSPG2-205ENST00000427897 TNFSF18Q9UNG2 199 aa14.86□□□□□ -0.03
HSPG2-205ENST00000427897 G3V3Q6 166 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 H3BTX0 84 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 BOLA2-SMG1P6H3BVE0 249 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 IFNA5P01569 189 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 GUK1Q16774 197 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 C12orf74Q32Q52 190 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 AMTNQ6UX39 209 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 OR10J6PQ8NGY7 276 aa14.85□□□□□ -0.03
HSPG2-205ENST00000427897 TRAV5A0A0B4J249 113 aa14.84□□□□□ -0.03
HSPG2-205ENST00000427897 A8MTW9 85 aa14.84□□□□□ -0.03
HSPG2-205ENST00000427897 MRPS12O15235 138 aaKnown RBP14.84□□□□□ -0.03
HSPG2-205ENST00000427897 MORN5Q5VZ52 161 aa14.84□□□□□ -0.03
HSPG2-205ENST00000427897 AKAP14Q86UN6 197 aa14.84□□□□□ -0.03
HSPG2-205ENST00000427897 SMIM3Q9BZL3 60 aa14.84□□□□□ -0.03
HSPG2-205ENST00000427897 KCNIP2Q9NS61 270 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms