RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 CCDC28AQ8IWP9 274 aa11.72□□□□□ -0.53
PSMD4-203ENST00000427779 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
PSMD4-203ENST00000427779 HYPMO75409 117 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 RLN2P04090 185 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 TMEM128Q5BJH2 165 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 SPANXN5Q5MJ07 72 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 LRTM2Q8N967 370 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
PSMD4-203ENST00000427779 RSL24D1Q9UHA3 163 aaKnown RBP11.71□□□□□ -0.53
PSMD4-203ENST00000427779 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
PSMD4-203ENST00000427779 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 OR5G3P0C626 314 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 LINC00869P0C866 280 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 INAFM2P0DMQ5 153 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 SELENOTP62341 195 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 TMED4Q7Z7H5 227 aa11.7□□□□□ -0.54
PSMD4-203ENST00000427779 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
PSMD4-203ENST00000427779 H3BP45 60 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 EREGO14944 169 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 CXCL2P19875 107 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 HOXA5P20719 270 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 VAMP1P23763 118 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 FAUP35544 74 aaKnown RBP11.69□□□□□ -0.54
PSMD4-203ENST00000427779 LINC00315P59091 139 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 PLP1P60201 277 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
PSMD4-203ENST00000427779 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 GAGE7O76087 117 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 LCN15Q6UWW0 184 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
PSMD4-203ENST00000427779 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
PSMD4-203ENST00000427779 CDPF1Q6NVV7 123 aa11.67□□□□□ -0.54
PSMD4-203ENST00000427779 SPCS2Q15005 226 aa11.66□□□□□ -0.54
PSMD4-203ENST00000427779 GFI1BQ5VTD9 330 aa11.66□□□□□ -0.54
PSMD4-203ENST00000427779 LYPD1Q8N2G4 141 aa11.66□□□□□ -0.54
PSMD4-203ENST00000427779 ARL6Q9H0F7 186 aa11.66□□□□□ -0.54
PSMD4-203ENST00000427779 ZNF331Q9NQX6 463 aaPredicted RBP11.66□□□□□ -0.54
PSMD4-203ENST00000427779 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
PSMD4-203ENST00000427779 HOXB5P09067 269 aa11.65□□□□□ -0.54
PSMD4-203ENST00000427779 ERVFC1-1P60608 527 aa11.65□□□□□ -0.54
PSMD4-203ENST00000427779 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
PSMD4-203ENST00000427779 CCDC190Q86UF4 302 aa11.65□□□□□ -0.54
PSMD4-203ENST00000427779 FRZBQ92765 325 aa11.65□□□□□ -0.54
PSMD4-203ENST00000427779 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
PSMD4-203ENST00000427779 CCDC59Q9P031 241 aaKnown RBP11.65□□□□□ -0.54
PSMD4-203ENST00000427779 MRPS12O15235 138 aaKnown RBP11.64□□□□□ -0.55
PSMD4-203ENST00000427779 SIVA1O15304 175 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 SFT2D2O95562 160 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 SMIM18P0DKX4 95 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PSMD4-203ENST00000427779 AP3S2P59780 193 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 DAZ2Q13117 558 aaKnown RBP11.64□□□□□ -0.55
PSMD4-203ENST00000427779 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 SLC25A21Q9BQT8 299 aaPredicted RBP11.64□□□□□ -0.55
PSMD4-203ENST00000427779 TMPRSS5Q9H3S3 457 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 FAT1Q14517 4588 aa11.64□□□□□ -0.55
PSMD4-203ENST00000427779 PPP1R1AQ13522 171 aa11.63□□□□□ -0.55
PSMD4-203ENST00000427779 Q5VSD8 79 aa11.63□□□□□ -0.55
PSMD4-203ENST00000427779 BPIFA4PQ86YQ2 179 aa11.63□□□□□ -0.55
PSMD4-203ENST00000427779 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
PSMD4-203ENST00000427779 PARD6GQ9BYG4 376 aaPredicted RBP11.63□□□□□ -0.55
PSMD4-203ENST00000427779 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
PSMD4-203ENST00000427779 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 A0A096LPF7 62 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 FNDC10F2Z333 226 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 K7EPK0 472 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 LEPP41159 167 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 ID3Q02535 119 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 TEPPQ6URK8 271 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 PATE2Q6UY27 113 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 Q6ZTI0 123 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 TOMM5Q8N4H5 51 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 VSIG2Q96IQ7 327 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 MGAT4CQ9UBM8 478 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
PSMD4-203ENST00000427779 IFNA5P01569 189 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 XGP55808 180 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
PSMD4-203ENST00000427779 POLR2GP62487 172 aaKnown RBP eCLIP11.61□□□□□ -0.55
PSMD4-203ENST00000427779 LINC00305Q7Z4B0 112 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 ZNF546Q86UE3 836 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 NFE4Q86UQ8 179 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 DYNC2LI1Q8TCX1 351 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
PSMD4-203ENST00000427779 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
PSMD4-203ENST00000427779 J3KRW8 73 aa11.6□□□□□ -0.55
PSMD4-203ENST00000427779 GOSR2O14653 212 aa11.6□□□□□ -0.55
PSMD4-203ENST00000427779 SSSCA1O60232 199 aa11.6□□□□□ -0.55
PSMD4-203ENST00000427779 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms