RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 A0A0J9YX75 114 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 RNF222A6NCQ9 220 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 H3BQ15 152 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 NUTF2P61970 127 aaKnown RBP17.16■□□□□ 0.34
PDGFA-205ENST00000426681 ZNF266Q14584 549 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 RNF182Q8N6D2 247 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 LRRC20Q8TCA0 184 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 SLC50A1Q9BRV3 221 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 MRPL32Q9BYC8 188 aaKnown RBP17.16■□□□□ 0.34
PDGFA-205ENST00000426681 ZNF331Q9NQX6 463 aaPredicted RBP17.16■□□□□ 0.34
PDGFA-205ENST00000426681 TIMM9Q9Y5J7 89 aa17.16■□□□□ 0.34
PDGFA-205ENST00000426681 C4BPBP20851 252 aa17.15■□□□□ 0.34
PDGFA-205ENST00000426681 SAT2Q96F10 170 aaPredicted RBP17.15■□□□□ 0.34
PDGFA-205ENST00000426681 F6UB75 175 aa17.14■□□□□ 0.33
PDGFA-205ENST00000426681 PSG3Q16557 428 aa17.14■□□□□ 0.33
PDGFA-205ENST00000426681 FFAR4Q5NUL3 377 aa17.14■□□□□ 0.33
PDGFA-205ENST00000426681 FAM167A-AS1Q96KT0 104 aa17.14■□□□□ 0.33
PDGFA-205ENST00000426681 A8MTW9 85 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 SNRPCP09234 159 aaKnown RBP17.13■□□□□ 0.33
PDGFA-205ENST00000426681 MIR17HGQ75NE6 70 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 CSNK1G2-AS1Q8NCQ2 148 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 SLC25A2Q9BXI2 301 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 C1QTNF4Q9BXJ3 329 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 ZNF586Q9NXT0 402 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 CLEC5AQ9NY25 188 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 FUT9Q9Y231 359 aa17.13■□□□□ 0.33
PDGFA-205ENST00000426681 SLC17A3O00476 420 aa17.12■□□□□ 0.33
PDGFA-205ENST00000426681 ZNF253O75346 499 aa17.12■□□□□ 0.33
PDGFA-205ENST00000426681 HIST1H1EP10412 219 aaKnown RBP17.12■□□□□ 0.33
PDGFA-205ENST00000426681 HLA-DMBP28068 263 aa17.12■□□□□ 0.33
PDGFA-205ENST00000426681 ZNF738Q8NE65 137 aa17.12■□□□□ 0.33
PDGFA-205ENST00000426681 OR4B1Q8NGF8 309 aa17.12■□□□□ 0.33
PDGFA-205ENST00000426681 RARRES2Q99969 163 aa17.12■□□□□ 0.33
PDGFA-205ENST00000426681 H3BTX0 84 aa17.11■□□□□ 0.33
PDGFA-205ENST00000426681 DUSP14O95147 198 aaKnown RBP17.11■□□□□ 0.33
PDGFA-205ENST00000426681 OR11H2Q8NH07 326 aa17.11■□□□□ 0.33
PDGFA-205ENST00000426681 MUC7Q8TAX7 377 aa17.11■□□□□ 0.33
PDGFA-205ENST00000426681 RFNGQ9Y644 331 aa17.11■□□□□ 0.33
PDGFA-205ENST00000426681 TRBV19A0A075B6N1 114 aa17.1■□□□□ 0.33
PDGFA-205ENST00000426681 IGKV3-20P01619 116 aa17.1■□□□□ 0.33
PDGFA-205ENST00000426681 RHOBP62745 196 aa17.1■□□□□ 0.33
PDGFA-205ENST00000426681 PSG9Q00887 426 aa17.1■□□□□ 0.33
PDGFA-205ENST00000426681 Q6ZNX1 250 aa17.1■□□□□ 0.33
PDGFA-205ENST00000426681 PSMG3Q9BT73 122 aaPredicted RBP17.1■□□□□ 0.33
PDGFA-205ENST00000426681 C3orf84H3BNL1 204 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 SMLR1H3BR10 107 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 PYYP10082 97 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 PDE6HQ13956 83 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 ACOT6Q3I5F7 207 aaPredicted RBP17.09■□□□□ 0.33
PDGFA-205ENST00000426681 OR8A1Q8NGG7 326 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 OR2G3Q8NGZ4 309 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 RPUSD4Q96CM3 377 aaKnown RBP17.09■□□□□ 0.33
PDGFA-205ENST00000426681 OR51M1Q9H341 326 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 XCL2Q9UBD3 114 aa17.09■□□□□ 0.33
PDGFA-205ENST00000426681 ARPC5O15511 151 aa17.08■□□□□ 0.32
PDGFA-205ENST00000426681 M6PRP20645 277 aa17.08■□□□□ 0.32
PDGFA-205ENST00000426681 CNN1P51911 297 aaKnown RBP17.08■□□□□ 0.32
PDGFA-205ENST00000426681 AMTNQ6UX39 209 aa17.08■□□□□ 0.32
PDGFA-205ENST00000426681 HSD17B11Q8NBQ5 300 aa17.08■□□□□ 0.32
PDGFA-205ENST00000426681 BORCS7-ASMTA0A0B4J1R7 106 aa17.07■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF705EA8MWA4 302 aaPredicted RBP17.07■□□□□ 0.32
PDGFA-205ENST00000426681 NDUFB4O95168 129 aa17.07■□□□□ 0.32
PDGFA-205ENST00000426681 ATP6V0CP27449 155 aa17.07■□□□□ 0.32
PDGFA-205ENST00000426681 PAXXQ9BUH6 204 aa17.07■□□□□ 0.32
PDGFA-205ENST00000426681 A0A0J9YWU9 116 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 TAAR5O14804 337 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 NBEAP1P0C6P0 100 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF705DP0CH99 300 aaPredicted RBP17.06■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF705BP0CI00 300 aaPredicted RBP17.06■□□□□ 0.32
PDGFA-205ENST00000426681 SERF2P84101 59 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 RPL7L1Q6DKI1 246 aaKnown RBP17.06■□□□□ 0.32
PDGFA-205ENST00000426681 FXYD5Q96DB9 178 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 MFFQ9GZY8 342 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 SLC35B3Q9H1N7 401 aa17.06■□□□□ 0.32
PDGFA-205ENST00000426681 DNAH7Q8WXX0 4024 aa17.05■□□□□ 0.32
PDGFA-205ENST00000426681 HMSDA8MTL9 139 aa17.05■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF705FA8MVS1 300 aaPredicted RBP17.05■□□□□ 0.32
PDGFA-205ENST00000426681 TAS2R45P59539 299 aa17.05■□□□□ 0.32
PDGFA-205ENST00000426681 IL17DQ8TAD2 202 aa17.05■□□□□ 0.32
PDGFA-205ENST00000426681 RNF141Q8WVD5 230 aa17.05■□□□□ 0.32
PDGFA-205ENST00000426681 GNPNAT1Q96EK6 184 aaPredicted RBP17.05■□□□□ 0.32
PDGFA-205ENST00000426681 MRPL53Q96EL3 112 aaKnown RBP17.05■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF503Q96F45 646 aa17.05■□□□□ 0.32
PDGFA-205ENST00000426681 FXYD7P58549 80 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 RAB2AP61019 212 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 HIST1H1AQ02539 215 aaPredicted RBP17.04■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF345Q14585 488 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 KHDC3LQ587J8 217 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 OR11H4Q8NGC9 324 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 BLNKQ8WV28 456 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 C11orf68Q9H3H3 251 aaKnown RBP17.04■□□□□ 0.32
PDGFA-205ENST00000426681 PRELID1Q9Y255 219 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 X6R8D5 127 aa17.04■□□□□ 0.32
PDGFA-205ENST00000426681 OR7C2O60412 319 aa17.03■□□□□ 0.32
PDGFA-205ENST00000426681 JTBO76095 146 aa17.03■□□□□ 0.32
PDGFA-205ENST00000426681 OR10J4P0C629 311 aa17.03■□□□□ 0.32
PDGFA-205ENST00000426681 ZNF705AQ6ZN79 300 aaPredicted RBP17.03■□□□□ 0.32
PDGFA-205ENST00000426681 OR10G4Q8NGN3 311 aa17.03■□□□□ 0.32
PDGFA-205ENST00000426681 OR10G9Q8NGN4 311 aa17.03■□□□□ 0.32
PDGFA-205ENST00000426681 OR10G7Q8NGN6 311 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms