RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 GOLGA4Q13439 2230 aaKnown RBP2.07□□□□□ -2.08
LINC01040-201ENST00000425048 KMT2BQ9UMN6 2715 aaPredicted RBP2.07□□□□□ -2.08
LINC01040-201ENST00000425048 SMIM28A0A1B0GU29 152 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 OR4C46A6NHA9 309 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 CPSF4LA6NMK7 179 aaKnown RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 RIIAD1A6NNX1 92 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF850A8MQ14 1090 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 H3BMH7 237 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 M0R2Z0 102 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 RS1O15537 224 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 IGLV3-25P01717 112 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ORM1P02763 201 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ISG15P05161 165 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 CRYGDP07320 174 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 RHOCP08134 193 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 H2BFMP0C1H6 154 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 PIRTP0C851 137 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 C8orf88P0DMB2 117 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 LINC00694P0DN24 101 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 CXCL8P10145 99 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 NTF3P20783 257 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 HIST1H1TP22492 207 aaPredicted RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 BLVRBP30043 206 aaPredicted RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 PEBP1P30086 187 aaKnown RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 FABP6P51161 128 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 TCTAP57738 103 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 RPS28P62857 69 aaKnown RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 TNFAIP6P98066 277 aaPredicted RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 RPEL1Q2QD12 228 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ETDBQ3ZM63 59 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 SPRNQ5BIV9 151 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 NMSQ5H8A3 153 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 MEIG1Q5JSS6 88 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 LINC01590Q5TEZ4 76 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 FAM159AQ6UWV7 190 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM136Q6ZRR5 245 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ASCL5Q7RTU5 278 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 HMGN2P46Q86SG4 172 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 BCORP1Q8N888 145 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF439Q8NDP4 499 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 OR52E2Q8NGJ4 325 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 OR51A4Q8NGJ6 313 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 OR4A16Q8NH70 328 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ZNRF2Q8NHG8 242 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 OR5P2Q8WZ92 322 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ST8SIA1Q92185 356 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ARPC1AQ92747 370 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 KLK6Q92876 244 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 BORCS7Q96B45 105 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 FLYWCH2Q96CP2 140 aaKnown RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 CARD19Q96LW7 228 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 SCGB3A2Q96PL1 93 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 OR2A5Q96R48 311 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 HSD17B10Q99714 261 aaKnown RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 MRPL32Q9BYC8 188 aaKnown RBP2.06□□□□□ -2.08
LINC01040-201ENST00000425048 VSIRQ9H7M9 311 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 ELOVL3Q9HB03 270 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 CES1P1Q9UKY3 287 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 HILPDAQ9Y5L2 63 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 MPC1Q9Y5U8 109 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 EML6Q6ZMW3 1958 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 DYSFO75923 2080 aa2.06□□□□□ -2.08
LINC01040-201ENST00000425048 SNRNP200O75643 2136 aaKnown RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 LOC107986453A0A1B0GWG9 222 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 C9JAW5 83 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 H3BMG7 143 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 J3KT08 172 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 K7EN84 100 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 KLF7O75840 302 aaPredicted RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 OR7C1O76099 320 aaPredicted RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CXorf1O96002 111 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 IGKV1D-33P01593 117 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 IGKV1-33P01594 117 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 APCSP02743 223 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 RBP4P02753 201 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CXCL10P02778 98 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 MT-ND6P03923 174 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 SLC25A5P05141 298 aaKnown RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CT45A6P0DMU7 189 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CT45A5P0DMU8 189 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CT45A7P0DMV0 189 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 RNASE2P10153 161 aaKnown RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 HIST1H1CP16403 213 aaKnown RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 GABRG2P18507 467 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 NMUP48645 174 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 RHOAP61586 193 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 SLC35B1P78383 322 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 KRTAP13-2Q52LG2 175 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CT45A1Q5HYN5 189 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 DMRTC1Q5HYR2 192 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 Q5XG85 94 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 RNASEKQ6P5S7 137 aaKnown RBP2.05□□□□□ -2.08
LINC01040-201ENST00000425048 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 PRSS41Q7RTY9 318 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 LYZL2Q7Z4W2 148 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 HSD11B1LQ7Z5J1 315 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 BPIFA4PQ86YQ2 179 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 GAPTQ8N292 157 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 LRRC25Q8N386 305 aaPredicted RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms