RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 LIME1Q9H400 295 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 MMP23AO75900 390 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 LILRA1O75019 489 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 WNT2P09544 360 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 IGLC2P0DOY2 106 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 IGLC3P0DOY3 106 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
SREBF2-202ENST00000424354 PRB3Q04118 309 aaPredicted RBP11.25□□□□□ -0.61
SREBF2-202ENST00000424354 ZNF876PQ49A33 203 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 ITGB1BP1O14713 200 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 PDE6HQ13956 83 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 MESP1Q9BRJ9 268 aa11.25□□□□□ -0.61
SREBF2-202ENST00000424354 SRSF8Q9BRL6 282 aaKnown RBP11.25□□□□□ -0.61
SREBF2-202ENST00000424354 MINOS1Q5TGZ0 78 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 CSTL1Q9H114 145 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 MINOS1-NBL1R4GNA1 71 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
SREBF2-202ENST00000424354 C2orf16Q68DN1 1984 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 FHL1Q13642 323 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.24□□□□□ -0.61
SREBF2-202ENST00000424354 C9orf118A6NHY6 69 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 SELLP14151 372 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
SREBF2-202ENST00000424354 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 IL18BPO95998 194 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 HIST1H4AP62805 103 aaKnown RBP11.23□□□□□ -0.61
SREBF2-202ENST00000424354 GATD1Q8NB37 220 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 ZCCHC24Q8N2G6 241 aaKnown RBP11.23□□□□□ -0.61
SREBF2-202ENST00000424354 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
SREBF2-202ENST00000424354 PKDREJQ9NTG1 2253 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 FREM3P0C091 2139 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 DKK4Q9UBT3 224 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
SREBF2-202ENST00000424354 E9PQ18 207 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 MAJINQ3KP22 176 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 NEGR1Q7Z3B1 354 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 Q8TAT8 98 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 KLHDC3Q9BQ90 382 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 ZNF581Q9P0T4 197 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 TRBV20-1A0A075B6N2 111 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 C5orf24Q7Z6I8 188 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 RCHY1Q96PM5 261 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 GAFA1Q96PS6 74 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 SPANXDQ9BXN6 97 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 SRRM4A7MD48 611 aaKnown RBP11.22□□□□□ -0.61
SREBF2-202ENST00000424354 C9JAW5 83 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 CMC4P56277 68 aaPredicted RBP11.22□□□□□ -0.61
SREBF2-202ENST00000424354 NPC2P61916 151 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 DNAJC30Q96LL9 226 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
SREBF2-202ENST00000424354 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
SREBF2-202ENST00000424354 STPG4Q8N801 248 aa11.21□□□□□ -0.61
SREBF2-202ENST00000424354 LEPROTO15243 131 aa11.21□□□□□ -0.61
SREBF2-202ENST00000424354 ZNF688P0C7X2 276 aa11.21□□□□□ -0.61
SREBF2-202ENST00000424354 SMKR1H3BMG3 65 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 PAX4O43316 350 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 ARMS2P0C7Q2 107 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.62
SREBF2-202ENST00000424354 ZNF415Q09FC8 603 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 Q6ZWC4 215 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.62
SREBF2-202ENST00000424354 THADAQ6YHU6 1953 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 E9PLN8 166 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.62
SREBF2-202ENST00000424354 FAM231DQ6ZW35 169 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 DTX1Q86Y01 620 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.62
SREBF2-202ENST00000424354 MCRIP2Q9BUT9 160 aaKnown RBP11.21□□□□□ -0.62
SREBF2-202ENST00000424354 EDA2RQ9HAV5 297 aa11.21□□□□□ -0.62
SREBF2-202ENST00000424354 C20orf204Q6ZNR8 217 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 JPT2Q9H910 190 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 PRSS46E5RG02 174 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 F8W1H4 67 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 LYNX1G3V0Z9 82 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 LYNX1P0DP58 116 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 ZNF407Q9C0G0 2248 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 NPSP0C0P6 89 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 LY6G5BQ8NDX9 201 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 IGKV1D-17A0A075B6S4 117 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 TRAV40A0A0B4J280 105 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 A0A1B0GUS0 222 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
SREBF2-202ENST00000424354 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
SREBF2-202ENST00000424354 K7EP34 96 aa11.19□□□□□ -0.62
SREBF2-202ENST00000424354 M0R1W7 72 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms