RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NAA38Q9BRA0 125 aaKnown RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 HDHD3Q9BSH5 251 aaPredicted RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 CHAC1Q9BUX1 264 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 SLC25A2Q9BXI2 301 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 PPDPFQ9H3Y8 114 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 DEPPQ9NTK1 212 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 TECRQ9NZ01 308 aaKnown RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 ONECUT1Q9UBC0 465 aa2.57□□□□□ -2
SDCBPP3-201ENST00000419629 GOLGB1Q14789 3259 aaKnown RBP2.57□□□□□ -2
SDCBPP3-201ENST00000419629 HELZP42694 1942 aaKnown RBP2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PLXNB3Q9ULL4 1909 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 DOCK6Q96HP0 2047 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PRRC2AP48634 2157 aaKnown RBP2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PDE4DIPQ5VU43 2346 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 TRBV20-1A0A075B6N2 111 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 A0A1B0GXF2 115 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 TCRBV4S1A1TA0A5B7 111 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ZNF840PA6NDX5 716 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 A8MWL6 223 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 F5H768 121 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 LINC01619G3V211 115 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 CCDC179H3BU77 68 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 K7EQS6 105 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PGLYRP1O75594 196 aaPredicted RBP2.56□□□□□ -2
SDCBPP3-201ENST00000419629 OR2H2O95918 312 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ORM1P02763 201 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ARL14EPLP0DKL9 152 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 GP9P14770 177 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ORM2P19652 201 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 GCHFRP30047 84 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 CXCL12P48061 93 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 EMP1P54849 157 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 EDDM3AQ14507 147 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PMVKQ15126 192 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 CFAP126Q5VTH2 177 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 MORN3Q6PF18 240 aaPredicted RBP2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ZNF818PQ6ZRF7 136 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 Q6ZSR3 168 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 MOB3BQ86TA1 216 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 CEND1Q8N111 149 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 OSR2Q8N2R0 312 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 RPRMLQ8N4K4 120 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 LINC00612Q8N6U2 182 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 FADS6Q8N9I5 356 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 OR2A1Q8NGT9 310 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ZNRF2Q8NHG8 242 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 NAT6Q93015 286 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ZC2HC1AQ96GY0 325 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 SPACA5Q96QH8 159 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 RASL11BQ9BPW5 248 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 AICDAQ9GZX7 198 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 FBXL15Q9H469 300 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 ZNF442Q9H7R0 627 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PLEKHA3Q9HB20 300 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PRTFDC1Q9NRG1 225 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 MPC1Q9Y5U8 109 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 NLRC5Q86WI3 1866 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 PTPRDP23468 1912 aa2.56□□□□□ -2
SDCBPP3-201ENST00000419629 IGKV1-8A0A0C4DH67 115 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 IGKV1-9A0A0C4DH69 117 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 C5orf49A4QMS7 147 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 A8MWV9 139 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 C4orf51C9J302 202 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 C9JAW5 83 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 CHEK1O14757 476 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 SPINK4O60575 86 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 PLXNA2O75051 1894 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 IGLV3-1P01715 115 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 P04436 131 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 IL4P05112 153 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 C8orf88P0DMB2 117 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 GLRXP35754 106 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 NMUP48645 174 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 DLX6P56179 175 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 RBM11P57052 281 aaKnown RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 TNFAIP6P98066 277 aaPredicted RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 SRYQ05066 204 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 TFF3Q07654 80 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 FAM53BQ14153 422 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 DIAPH2-AS1Q14236 149 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 MDC1Q14676 2089 aaKnown RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 C3AR1Q16581 482 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 POM121L1PQ3SYA9 428 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 C9orf66Q5T8R8 295 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 RHBDD2Q6NTF9 364 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 FAM159AQ6UWV7 190 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 HEATR5AQ86XA9 2040 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 FGFRL1Q8N441 504 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 KIR3DL3Q8N743 410 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 KIR2DL5BQ8NHK3 375 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 IL1F10Q8WWZ1 152 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 ST8SIA1Q92185 356 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 BORCS8Q96FH0 119 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 COQ2Q96H96 371 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 HSD17B10Q99714 261 aaKnown RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 PRADC1Q9BSG0 188 aa2.55□□□□□ -2
SDCBPP3-201ENST00000419629 RNASE7Q9H1E1 156 aaKnown RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
SDCBPP3-201ENST00000419629 TP73-AS1Q9UF72 201 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms