RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 NPCDR1Q9BY65 106 aa9.54□□□□□ -0.88
SSB-203ENST00000413002 MED28Q9H204 178 aa9.54□□□□□ -0.88
SSB-203ENST00000413002 X6R8D5 127 aa9.54□□□□□ -0.88
SSB-203ENST00000413002 RYR3Q15413 4870 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 IGHV3OR16-12A0A075B7B8 117 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 IGHV4-28A0A0C4DH34 117 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 H3BQ15 152 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 SLC17A3O00476 420 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 RBMY1A1P0DJD3 496 aaKnown RBP9.53□□□□□ -0.88
SSB-203ENST00000413002 RBMY1CP0DJD4 496 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 RPL12P30050 165 aaKnown RBP9.53□□□□□ -0.88
SSB-203ENST00000413002 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
SSB-203ENST00000413002 NUTF2P61970 127 aaKnown RBP9.53□□□□□ -0.88
SSB-203ENST00000413002 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
SSB-203ENST00000413002 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 ZNF709Q8N972 641 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 ZNF738Q8NE65 137 aa9.53□□□□□ -0.88
SSB-203ENST00000413002 A0A087X0K7 114 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
SSB-203ENST00000413002 PSG9Q00887 426 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 SAMD13Q5VXD3 122 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 Q8NAQ8 132 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 OR1L4Q8NGR5 311 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 WDR61Q9GZS3 305 aaKnown RBP9.52□□□□□ -0.89
SSB-203ENST00000413002 HSPB11Q9Y547 144 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
SSB-203ENST00000413002 ZNF705EA8MWA4 302 aaPredicted RBP9.51□□□□□ -0.89
SSB-203ENST00000413002 PET100P0DJ07 73 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 CNN1P51911 297 aaKnown RBP9.51□□□□□ -0.89
SSB-203ENST00000413002 PSG3Q16557 428 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 Q5BKY6 102 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 CHAC2Q8WUX2 184 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 PFDN5Q99471 154 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 ATP5SQ99766 215 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 C1QTNF4Q9BXJ3 329 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 MFFQ9GZY8 342 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 WFDC1Q9HC57 220 aa9.51□□□□□ -0.89
SSB-203ENST00000413002 M0R2Z0 102 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 MPDU1O75352 247 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 IGLC2P0DOY2 106 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 PYYP10082 97 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
SSB-203ENST00000413002 RGS21Q2M5E4 152 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 AMTNQ6UX39 209 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
SSB-203ENST00000413002 C11orf68Q9H3H3 251 aaKnown RBP9.5□□□□□ -0.89
SSB-203ENST00000413002 ZNF331Q9NQX6 463 aaPredicted RBP9.5□□□□□ -0.89
SSB-203ENST00000413002 ZNF586Q9NXT0 402 aa9.5□□□□□ -0.89
SSB-203ENST00000413002 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
SSB-203ENST00000413002 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 J3QL48 77 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 EIF3GO75821 320 aaKnown RBP eCLIP9.49□□□□□ -0.894e-7■■□□□ 13
SSB-203ENST00000413002 MIFP14174 115 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 LCN15Q6UWW0 184 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 ZNF767PQ75MW2 155 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 MIR17HGQ75NE6 70 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 OR8A1Q8NGG7 326 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 RNF24Q9Y225 148 aa9.49□□□□□ -0.89
SSB-203ENST00000413002 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
SSB-203ENST00000413002 PRM2P04554 102 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 EMP1P54849 157 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 RHOBP62745 196 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 ZNF705AQ6ZN79 300 aaPredicted RBP9.48□□□□□ -0.89
SSB-203ENST00000413002 PHLDA1Q8WV24 401 aaPredicted RBP9.48□□□□□ -0.89
SSB-203ENST00000413002 BLNKQ8WV28 456 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
SSB-203ENST00000413002 SLC25A2Q9BXI2 301 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 HRH4Q9H3N8 390 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 CELA1Q9UNI1 258 aa9.48□□□□□ -0.89
SSB-203ENST00000413002 TRAV12-2A0A075B6T6 113 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 LCE6AA0A183 80 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 A8MTW9 85 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 IFNA5P01569 189 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 CXCL2P19875 107 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 OXA1LQ15070 435 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
SSB-203ENST00000413002 BAP18Q8IXM2 172 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 SCGB1C1Q8TD33 95 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
SSB-203ENST00000413002 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
SSB-203ENST00000413002 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 CRXO43186 299 aaPredicted RBP9.46□□□□□ -0.9
SSB-203ENST00000413002 NDUFB4O95168 129 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 OR10J4P0C629 311 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 PPP1R14DQ9NXH3 145 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 RYR2Q92736 4967 aa9.46□□□□□ -0.9
SSB-203ENST00000413002 NUPR2A6NF83 97 aa9.45□□□□□ -0.9
SSB-203ENST00000413002 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
SSB-203ENST00000413002 M0R3E3 92 aa9.45□□□□□ -0.9
SSB-203ENST00000413002 GIPP09681 153 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms