RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RNF24Q9Y225 148 aa13.65□□□□□ -0.22
TRIM56-202ENST00000412507 NUPR2A6NF83 97 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 SNRPCP09234 159 aaKnown RBP13.64□□□□□ -0.23
TRIM56-202ENST00000412507 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 B2MP61769 119 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 PSG9Q00887 426 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 OR1L4Q8NGR5 311 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 LRRC20Q8TCA0 184 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 SLC39A9Q9NUM3 307 aa13.64□□□□□ -0.23
TRIM56-202ENST00000412507 MPC2O95563 127 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-202ENST00000412507 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-202ENST00000412507 CEMP1Q6PRD7 247 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-202ENST00000412507 BPIFA4PQ86YQ2 179 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 ZNF738Q8NE65 137 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 CHAC2Q8WUX2 184 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 RNF126Q9BV68 326 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 ALMS1Q8TCU4 4167 aa13.63□□□□□ -0.23
TRIM56-202ENST00000412507 TRAV5A0A0B4J249 113 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 MPDU1O75352 247 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 CXCL3P19876 107 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 CLINT1Q14677 625 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 THAP6Q8TBB0 222 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 PHLDA1Q8WV24 401 aaPredicted RBP13.62□□□□□ -0.23
TRIM56-202ENST00000412507 PFDN5Q99471 154 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 MED28Q9H204 178 aa13.62□□□□□ -0.23
TRIM56-202ENST00000412507 A8MTW9 85 aa13.61□□□□□ -0.23
TRIM56-202ENST00000412507 H3BTX0 84 aa13.61□□□□□ -0.23
TRIM56-202ENST00000412507 JTBO76095 146 aa13.61□□□□□ -0.23
TRIM56-202ENST00000412507 PRB4P10163 310 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-202ENST00000412507 PSG3Q16557 428 aa13.61□□□□□ -0.23
TRIM56-202ENST00000412507 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
TRIM56-202ENST00000412507 MFFQ9GZY8 342 aa13.61□□□□□ -0.23
TRIM56-202ENST00000412507 IGHV3OR16-12A0A075B7B8 117 aa13.6□□□□□ -0.23
TRIM56-202ENST00000412507 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
TRIM56-202ENST00000412507 PET100P0DJ07 73 aa13.6□□□□□ -0.23
TRIM56-202ENST00000412507 CXCL2P19875 107 aa13.6□□□□□ -0.23
TRIM56-202ENST00000412507 CNN1P51911 297 aaKnown RBP13.6□□□□□ -0.23
TRIM56-202ENST00000412507 AMTNQ6UX39 209 aa13.6□□□□□ -0.23
TRIM56-202ENST00000412507 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
TRIM56-202ENST00000412507 ZNF331Q9NQX6 463 aaPredicted RBP13.6□□□□□ -0.23
TRIM56-202ENST00000412507 HYDINQ4G0P3 5121 aa13.59□□□□□ -0.23
TRIM56-202ENST00000412507 SLC50A1Q9BRV3 221 aa13.59□□□□□ -0.23
TRIM56-202ENST00000412507 MBD2Q9UBB5 411 aa13.59□□□□□ -0.23
TRIM56-202ENST00000412507 KLK5Q9Y337 293 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-202ENST00000412507 DNAH1Q9P2D7 4330 aa13.59□□□□□ -0.23
TRIM56-202ENST00000412507 ZNF705FA8MVS1 300 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-202ENST00000412507 H3BQ15 152 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 SLC17A3O00476 420 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-202ENST00000412507 GCSAMLQ5JQS6 135 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 OR11H7Q8NGC8 314 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 OR8A1Q8NGG7 326 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 NEU1Q99519 415 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 WDR61Q9GZS3 305 aaKnown RBP13.58□□□□□ -0.24
TRIM56-202ENST00000412507 HRH4Q9H3N8 390 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 HSPB11Q9Y547 144 aa13.58□□□□□ -0.24
TRIM56-202ENST00000412507 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
TRIM56-202ENST00000412507 SPINK13Q1W4C9 94 aa13.57□□□□□ -0.24
TRIM56-202ENST00000412507 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
TRIM56-202ENST00000412507 RPUSD4Q96CM3 377 aaKnown RBP13.57□□□□□ -0.24
TRIM56-202ENST00000412507 ATP5SQ99766 215 aa13.57□□□□□ -0.24
TRIM56-202ENST00000412507 CELA1Q9UNI1 258 aa13.57□□□□□ -0.24
TRIM56-202ENST00000412507 hCG_2014768A0A024R1R8 64 aa13.56□□□□□ -0.24
TRIM56-202ENST00000412507 M0R2Z0 102 aa13.56□□□□□ -0.24
TRIM56-202ENST00000412507 FCN2Q15485 313 aa13.56□□□□□ -0.24
TRIM56-202ENST00000412507 ASB13Q8WXK3 278 aa13.56□□□□□ -0.24
TRIM56-202ENST00000412507 SAT2Q96F10 170 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-202ENST00000412507 SMIM3Q9BZL3 60 aa13.56□□□□□ -0.24
TRIM56-202ENST00000412507 GOLT1BQ9Y3E0 138 aa13.56□□□□□ -0.24
TRIM56-202ENST00000412507 SMIM9A6NGZ8 99 aa13.55□□□□□ -0.24
TRIM56-202ENST00000412507 RHOBP62745 196 aa13.55□□□□□ -0.24
TRIM56-202ENST00000412507 IGF2BP2-AS1Q96M15 143 aa13.55□□□□□ -0.24
TRIM56-202ENST00000412507 ZNF586Q9NXT0 402 aa13.55□□□□□ -0.24
TRIM56-202ENST00000412507 A0A1B0GVG6 124 aa13.54□□□□□ -0.24
TRIM56-202ENST00000412507 CRXO43186 299 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-202ENST00000412507 AMBPP02760 352 aa13.54□□□□□ -0.24
TRIM56-202ENST00000412507 GUK1Q16774 197 aa13.54□□□□□ -0.24
TRIM56-202ENST00000412507 KCNIP2Q9NS61 270 aa13.54□□□□□ -0.24
TRIM56-202ENST00000412507 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
TRIM56-202ENST00000412507 TMEM14CQ9P0S9 112 aa13.54□□□□□ -0.24
TRIM56-202ENST00000412507 PRAC2D3DTV9 90 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 C17orf112F2Z3M2 114 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 BOLA2-SMG1P6H3BVE0 249 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 INSP01308 110 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 PYYP10082 97 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 EMP1P54849 157 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 Q6ZTC4 211 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 ZNF767PQ75MW2 155 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 MIR17HGQ75NE6 70 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 BAP18Q8IXM2 172 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 LINC00476Q8WZB0 136 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 TMEM208Q9BTX3 173 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 SLC25A2Q9BXI2 301 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 RFNGQ9Y644 331 aa13.53□□□□□ -0.24
TRIM56-202ENST00000412507 TRAV12-2A0A075B6T6 113 aa13.52□□□□□ -0.25
TRIM56-202ENST00000412507 IFNA5P01569 189 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms