RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 WNK1Q9H4A3 2382 aa15.25■□□□□ 0.03
PTPA-208ENST00000411917 IGHV3-49A0A0A0MS15 119 aa15.25■□□□□ 0.03
PTPA-208ENST00000411917 EDN2P20800 178 aa15.25■□□□□ 0.03
PTPA-208ENST00000411917 FGF8P55075 233 aaPredicted RBP15.25■□□□□ 0.03
PTPA-208ENST00000411917 PSG9Q00887 426 aa15.25■□□□□ 0.03
PTPA-208ENST00000411917 ZNF586Q9NXT0 402 aa15.25■□□□□ 0.03
PTPA-208ENST00000411917 IGHV3OR16-13A0A075B7E8 117 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 IGHV3-74A0A0B4J1X5 117 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 IGHV3-66A0A0C4DH42 116 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 H3BQ15 152 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 PAFAH1B2P68402 229 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 SPAG8Q99932 426 aaPredicted RBP15.24■□□□□ 0.03
PTPA-208ENST00000411917 SMDT1Q9H4I9 107 aa15.24■□□□□ 0.03
PTPA-208ENST00000411917 SOCS3O14543 225 aa15.23■□□□□ 0.03
PTPA-208ENST00000411917 SAP30O75446 220 aa15.23■□□□□ 0.03
PTPA-208ENST00000411917 CD33P20138 364 aa15.23■□□□□ 0.03
PTPA-208ENST00000411917 PRR31Q5SQ13 230 aa15.23■□□□□ 0.03
PTPA-208ENST00000411917 MRPL53Q96EL3 112 aaKnown RBP15.23■□□□□ 0.03
PTPA-208ENST00000411917 VWFP04275 2813 aa15.23■□□□□ 0.03
PTPA-208ENST00000411917 TRRAPQ9Y4A5 3859 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 ZNF785A8K8V0 405 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 ISLRO14498 428 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 NDUFB4O95168 129 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 OR10J4P0C629 311 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 CCL20P78556 96 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 RBPMS2Q6ZRY4 209 aaKnown RBP15.22■□□□□ 0.03
PTPA-208ENST00000411917 DCANP1Q8TF63 244 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 FAM210AQ96ND0 272 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 ZNF331Q9NQX6 463 aaPredicted RBP15.22■□□□□ 0.03
PTPA-208ENST00000411917 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
PTPA-208ENST00000411917 RAB19A4D1S5 217 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 LINC00862A6NCI5 91 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 FAM74A7A6NL05 159 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 EIF3GO75821 320 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTPA-208ENST00000411917 BCL2P10415 239 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 CD300EQ496F6 205 aaPredicted RBP15.21■□□□□ 0.03
PTPA-208ENST00000411917 LCN12Q6JVE5 192 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 TMEM61Q8N0U2 210 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 MS4A6AQ9H2W1 248 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 TMPRSS5Q9H3S3 457 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 OTORQ9NRC9 128 aa15.21■□□□□ 0.03
PTPA-208ENST00000411917 K7EQG2 157 aa15.2■□□□□ 0.02
PTPA-208ENST00000411917 FAM110AQ9BQ89 295 aa15.2■□□□□ 0.02
PTPA-208ENST00000411917 OR4C46A6NHA9 309 aa15.19■□□□□ 0.02
PTPA-208ENST00000411917 ZNF506Q5JVG8 444 aa15.19■□□□□ 0.02
PTPA-208ENST00000411917 CCDC28AQ8IWP9 274 aa15.19■□□□□ 0.02
PTPA-208ENST00000411917 AAMDCQ9H7C9 122 aa15.19■□□□□ 0.02
PTPA-208ENST00000411917 GNG13Q9P2W3 67 aa15.19■□□□□ 0.02
PTPA-208ENST00000411917 VAX2Q9UIW0 290 aa15.19■□□□□ 0.02
PTPA-208ENST00000411917 LOC102723971A0A1B0GUV8 181 aa15.18■□□□□ 0.02
PTPA-208ENST00000411917 ID1P41134 155 aa15.18■□□□□ 0.02
PTPA-208ENST00000411917 CMC4P56277 68 aaPredicted RBP15.18■□□□□ 0.02
PTPA-208ENST00000411917 IQCF2Q8IXL9 164 aa15.18■□□□□ 0.02
PTPA-208ENST00000411917 EIF4E3Q8N5X7 224 aaKnown RBP15.18■□□□□ 0.02
PTPA-208ENST00000411917 Q9H3A6 140 aa15.18■□□□□ 0.02
PTPA-208ENST00000411917 ZMAT5Q9UDW3 170 aaKnown RBP15.18■□□□□ 0.02
PTPA-208ENST00000411917 RBFOX3A6NFN3 312 aa15.17■□□□□ 0.02
PTPA-208ENST00000411917 SLC17A3O00476 420 aa15.17■□□□□ 0.02
PTPA-208ENST00000411917 PAGE4O60829 102 aa15.17■□□□□ 0.02
PTPA-208ENST00000411917 RPL11P62913 178 aaKnown RBP15.17■□□□□ 0.02
PTPA-208ENST00000411917 MEF2BQ02080 365 aaPredicted RBP15.17■□□□□ 0.02
PTPA-208ENST00000411917 C5orf17Q8NAS9 161 aa15.17■□□□□ 0.02
PTPA-208ENST00000411917 RXFP4Q8TDU9 374 aa15.17■□□□□ 0.02
PTPA-208ENST00000411917 BLNKQ8WV28 456 aa15.17■□□□□ 0.02
PTPA-208ENST00000411917 PCNPQ8WW12 178 aaKnown RBP15.17■□□□□ 0.02
PTPA-208ENST00000411917 ZNF256Q9Y2P7 627 aaPredicted RBP15.17■□□□□ 0.02
PTPA-208ENST00000411917 YTHDF2Q9Y5A9 579 aaKnown RBP15.17■□□□□ 0.02
PTPA-208ENST00000411917 TRAV8-2A0A0B4J237 113 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 A0A1B0GV50 99 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 SERTM2A0A1B0GWG4 89 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 GGTLC3B5MD39 225 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 DNASE2O00115 360 aaPredicted RBP15.16■□□□□ 0.02
PTPA-208ENST00000411917 PDE6DO43924 150 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 SNRPD3P62318 126 aaKnown RBP15.16■□□□□ 0.02
PTPA-208ENST00000411917 UQCC3Q6UW78 93 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 C16orf92Q96LL3 132 aa15.16■□□□□ 0.02
PTPA-208ENST00000411917 RANP62826 216 aaKnown RBP15.15■□□□□ 0.02
PTPA-208ENST00000411917 NDUFA5Q16718 116 aa15.15■□□□□ 0.02
PTPA-208ENST00000411917 BEAN1Q3B7T3 259 aa15.15■□□□□ 0.02
PTPA-208ENST00000411917 HIST1H2BAQ96A08 127 aa15.15■□□□□ 0.02
PTPA-208ENST00000411917 C11orf94C9JXX5 98 aa15.14■□□□□ 0.01
PTPA-208ENST00000411917 TMEM250H0YL14 139 aa15.14■□□□□ 0.01
PTPA-208ENST00000411917 PSG3Q16557 428 aa15.14■□□□□ 0.01
PTPA-208ENST00000411917 C11orf52Q96A22 123 aa15.14■□□□□ 0.01
PTPA-208ENST00000411917 RPUSD4Q96CM3 377 aaKnown RBP15.14■□□□□ 0.01
PTPA-208ENST00000411917 PGPA6NDG6 321 aa15.13■□□□□ 0.01
PTPA-208ENST00000411917 FBLL1A6NHQ2 334 aaKnown RBP15.13■□□□□ 0.01
PTPA-208ENST00000411917 F6UZH7 168 aa15.13■□□□□ 0.01
PTPA-208ENST00000411917 ICAM4Q14773 271 aa15.13■□□□□ 0.01
PTPA-208ENST00000411917 PEA15Q15121 130 aa15.13■□□□□ 0.01
PTPA-208ENST00000411917 RBAKDNA6NC62 111 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 CSN1S1P47710 185 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 CD81P60033 236 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 UBE2G2P60604 165 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 SUMO1P63165 101 aaKnown RBP15.12■□□□□ 0.01
PTPA-208ENST00000411917 EGFEM1PQ0D2K5 195 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 CST9LP1Q5W188 147 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 EPDR1Q9UM22 224 aa15.12■□□□□ 0.01
PTPA-208ENST00000411917 CMYA5Q8N3K9 4069 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms