RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 WFDC1Q9HC57 220 aa13.99□□□□□ -0.17
RTN4-207ENST00000402434 ZNF331Q9NQX6 463 aaPredicted RBP13.99□□□□□ -0.17
RTN4-207ENST00000402434 A0A0J9YWU9 116 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 A8MTW9 85 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 C17orf112F2Z3M2 114 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 H3BQ15 152 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 IFNA5P01569 189 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 FAM78BQ5VT40 261 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
RTN4-207ENST00000402434 PSG3Q16557 428 aa13.97□□□□□ -0.17
RTN4-207ENST00000402434 OR4B1Q8NGF8 309 aa13.97□□□□□ -0.17
RTN4-207ENST00000402434 LRRC20Q8TCA0 184 aa13.97□□□□□ -0.17
RTN4-207ENST00000402434 SCGB1C1Q8TD33 95 aa13.97□□□□□ -0.17
RTN4-207ENST00000402434 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
RTN4-207ENST00000402434 SLC50A1Q9BRV3 221 aa13.97□□□□□ -0.17
RTN4-207ENST00000402434 TMEM14CQ9P0S9 112 aa13.97□□□□□ -0.17
RTN4-207ENST00000402434 ZNF705EA8MWA4 302 aaPredicted RBP13.96□□□□□ -0.17
RTN4-207ENST00000402434 IGKV3-20P01619 116 aa13.96□□□□□ -0.17
RTN4-207ENST00000402434 SNRPCP09234 159 aaKnown RBP13.96□□□□□ -0.17
RTN4-207ENST00000402434 GUK1Q16774 197 aa13.96□□□□□ -0.17
RTN4-207ENST00000402434 HLA-DMBP28068 263 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 PSG9Q00887 426 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 ZNF738Q8NE65 137 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 OR2T35Q8NGX2 323 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 FAM167A-AS1Q96KT0 104 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 CLEC5AQ9NY25 188 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
RTN4-207ENST00000402434 SLC17A3O00476 420 aa13.94□□□□□ -0.18
RTN4-207ENST00000402434 AMTNQ6UX39 209 aa13.94□□□□□ -0.18
RTN4-207ENST00000402434 C11orf68Q9H3H3 251 aaKnown RBP13.94□□□□□ -0.18
RTN4-207ENST00000402434 ZNF586Q9NXT0 402 aa13.94□□□□□ -0.18
RTN4-207ENST00000402434 G3V3Q6 166 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 H3BTX0 84 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 ZNF253O75346 499 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 DUSP14O95147 198 aaKnown RBP13.93□□□□□ -0.18
RTN4-207ENST00000402434 HIST1H1EP10412 219 aaKnown RBP13.93□□□□□ -0.18
RTN4-207ENST00000402434 CNN1P51911 297 aaKnown RBP13.93□□□□□ -0.18
RTN4-207ENST00000402434 SLC25A2Q9BXI2 301 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 MRPL32Q9BYC8 188 aaKnown RBP13.93□□□□□ -0.18
RTN4-207ENST00000402434 SLC35B3Q9H1N7 401 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 X6R8D5 127 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 CSMD3Q7Z407 3707 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 TRBV19A0A075B6N1 114 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 FFAR4Q5NUL3 377 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 MIR17HGQ75NE6 70 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 Q8NAQ8 132 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 OR8A1Q8NGG7 326 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 RPUSD4Q96CM3 377 aaKnown RBP13.93□□□□□ -0.18
RTN4-207ENST00000402434 TNFSF18Q9UNG2 199 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 FUT9Q9Y231 359 aa13.93□□□□□ -0.18
RTN4-207ENST00000402434 ZNF705DP0CH99 300 aaPredicted RBP13.92□□□□□ -0.18
RTN4-207ENST00000402434 ZNF705BP0CI00 300 aaPredicted RBP13.92□□□□□ -0.18
RTN4-207ENST00000402434 MIFP14174 115 aa13.92□□□□□ -0.18
RTN4-207ENST00000402434 PDE6HQ13956 83 aa13.92□□□□□ -0.18
RTN4-207ENST00000402434 ZNF266Q14584 549 aa13.92□□□□□ -0.18
RTN4-207ENST00000402434 ZFAND6Q6FIF0 208 aa13.92□□□□□ -0.18
RTN4-207ENST00000402434 ZNF705AQ6ZN79 300 aaPredicted RBP13.92□□□□□ -0.18
RTN4-207ENST00000402434 INO80EQ8NBZ0 244 aaPredicted RBP13.92□□□□□ -0.18
RTN4-207ENST00000402434 TIMM9Q9Y5J7 89 aa13.92□□□□□ -0.18
RTN4-207ENST00000402434 RNF222A6NCQ9 220 aa13.91□□□□□ -0.18
RTN4-207ENST00000402434 PYYP10082 97 aa13.91□□□□□ -0.18
RTN4-207ENST00000402434 FXYD7P58549 80 aa13.91□□□□□ -0.18
RTN4-207ENST00000402434 MFFQ9GZY8 342 aa13.91□□□□□ -0.18
RTN4-207ENST00000402434 RFNGQ9Y644 331 aa13.91□□□□□ -0.18
RTN4-207ENST00000402434 FXYD6-FXYD2A0A087WZ82 144 aa13.9□□□□□ -0.18
RTN4-207ENST00000402434 ZNF705FA8MVS1 300 aaPredicted RBP13.9□□□□□ -0.18
RTN4-207ENST00000402434 NDUFB4O95168 129 aa13.9□□□□□ -0.18
RTN4-207ENST00000402434 RBMY1A1P0DJD3 496 aaKnown RBP13.89□□□□□ -0.19
RTN4-207ENST00000402434 RBMY1CP0DJD4 496 aa13.89□□□□□ -0.19
RTN4-207ENST00000402434 HIST1H1AQ02539 215 aaPredicted RBP13.89□□□□□ -0.19
RTN4-207ENST00000402434 RBMY1FQ15415 496 aaKnown RBP13.89□□□□□ -0.19
RTN4-207ENST00000402434 NEU1Q99519 415 aa13.89□□□□□ -0.19
RTN4-207ENST00000402434 OR51M1Q9H341 326 aa13.89□□□□□ -0.19
RTN4-207ENST00000402434 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
RTN4-207ENST00000402434 AMBPP02760 352 aa13.88□□□□□ -0.19
RTN4-207ENST00000402434 NBEAP1P0C6P0 100 aa13.88□□□□□ -0.19
RTN4-207ENST00000402434 RHOBP62745 196 aa13.88□□□□□ -0.19
RTN4-207ENST00000402434 FXYD5Q96DB9 178 aa13.88□□□□□ -0.19
RTN4-207ENST00000402434 TENM2Q9NT68 2774 aa13.88□□□□□ -0.19
RTN4-207ENST00000402434 PRAC2D3DTV9 90 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 DEFB4AO15263 64 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 M6PRP20645 277 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 ACOT6Q3I5F7 207 aaPredicted RBP13.87□□□□□ -0.19
RTN4-207ENST00000402434 OR2G3Q8NGZ4 309 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 MRPL53Q96EL3 112 aaKnown RBP13.87□□□□□ -0.19
RTN4-207ENST00000402434 ZNF503Q96F45 646 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 IGF2BP2-AS1Q96M15 143 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 PSMG3Q9BT73 122 aaPredicted RBP13.87□□□□□ -0.19
RTN4-207ENST00000402434 PAXXQ9BUH6 204 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 CRXO43186 299 aaPredicted RBP13.87□□□□□ -0.19
RTN4-207ENST00000402434 PRB4P10163 310 aaPredicted RBP13.87□□□□□ -0.19
RTN4-207ENST00000402434 SPINK13Q1W4C9 94 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 C1orf158Q8N1D5 194 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 HSD17B11Q8NBQ5 300 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 BLNKQ8WV28 456 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 RNF141Q8WVD5 230 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 PRELID1Q9Y255 219 aa13.87□□□□□ -0.19
RTN4-207ENST00000402434 SMIM9A6NGZ8 99 aa13.86□□□□□ -0.19
RTN4-207ENST00000402434 M0R2Z0 102 aa13.86□□□□□ -0.19
RTN4-207ENST00000402434 OR10J4P0C629 311 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms