RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PTHLHP12272 177 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 GNG4P50150 75 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 HIGD2BQ4VC39 106 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 ZNF418Q8TF45 676 aaPredicted RBP2.66□□□□□ -1.98
XRN1-202ENST00000392981 OR2A5Q96R48 311 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 DUSP21Q9H596 190 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 ADAMTSL1Q8N6G6 1762 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 TNS3Q68CZ2 1445 aa2.66□□□□□ -1.98
XRN1-202ENST00000392981 SOCS3O14543 225 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 NDUFB2O95178 105 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 TRGC1P0CF51 173 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 FBXL19-AS1Q494R0 122 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 ZNF660Q6AZW8 331 aaPredicted RBP2.65□□□□□ -1.98
XRN1-202ENST00000392981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 KLHL30-AS1Q8NEE0 82 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 FDCSPQ8NFU4 85 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 SLC35B3Q9H1N7 401 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 RLFQ13129 1914 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 CCDC88AQ3V6T2 1871 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 IGKV2D-30A0A075B6S6 120 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 IGHV3-13P01766 116 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 SPATA45Q537H7 98 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 ALKAL1Q6UXT8 129 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 SLC25A46Q96AG3 418 aa2.65□□□□□ -1.98
XRN1-202ENST00000392981 IFITM5A6NNB3 132 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 IGHV4-34P06331 123 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 CXCL8P10145 99 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 BLVRBP30043 206 aaPredicted RBP2.65□□□□□ -1.99
XRN1-202ENST00000392981 HEPN1Q6WQI6 88 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 WDR86Q86TI4 376 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 ZIC4Q8N9L1 334 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 GTSF1Q8WW33 167 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 ZC2HC1AQ96GY0 325 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 SHANK2-AS3Q9BTD1 123 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 NDUFB11Q9NX14 153 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 KCPQ6ZWJ8 1503 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 ZNF638Q14966 1978 aaKnown RBP2.65□□□□□ -1.99
XRN1-202ENST00000392981 DISP2A7MBM2 1401 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 IGLV11-55A0A075B6I3 123 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 IGHV3-35A0A0C4DH35 117 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 A8MWV9 139 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 GNB1P62873 340 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 AMN1Q8IY45 258 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 PLEKHB2Q96CS7 222 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 SND1-IT1Q9HBX3 110 aa2.65□□□□□ -1.99
XRN1-202ENST00000392981 A0A0J9YWU9 116 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 A0A1B0GW64 132 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 M0R135 149 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 HIST1H1DP16402 221 aaKnown RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 ZNF93P35789 620 aaPredicted RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 LPAR6P43657 344 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 CRIP3Q6Q6R5 217 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 H1FXQ92522 213 aaKnown RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 DPH3Q96FX2 82 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 ZNF799Q96GE5 643 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 DYNLRB1Q9NP97 96 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 CA10Q9NS85 328 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 IL36BQ9NZH7 164 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 SPCS1Q9Y6A9 102 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 DSPP15924 2871 aaKnown RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 C1orf167Q5SNV9 1468 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 ATG2AQ2TAZ0 1938 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 LINC01565O15544 149 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 HIST1H2BKO60814 126 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 PPP1R17O96001 155 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 HIST1H2BJP06899 126 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 UBE2BP63146 152 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 MEIG1Q5JSS6 88 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 ZNF322Q6U7Q0 402 aaPredicted RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 ITLN2Q8WWU7 325 aaPredicted RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 OR8B2Q96RD0 313 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 DNAJC15Q9Y5T4 150 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 ICOSQ9Y6W8 199 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 TTC3P53804 2025 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 IGKV6D-21A0A0A0MT36 114 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 IGHV5-51A0A0C4DH38 117 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 H3BMG7 143 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 SLC25A20O43772 301 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 C9orf153Q5TBE3 101 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 C18orf15Q96N68 181 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 DIDO1Q9BTC0 2240 aaKnown RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 TRAV13-1A0A0B4J241 112 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 LOC730098B7Z3J9 87 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 H7C423 109 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 PPP1R3DO95685 299 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 PIPP12273 146 aaPredicted RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 EVI2AP22794 236 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 S100A7L2Q5SY68 101 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 RNF185Q96GF1 192 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 TTTY13Q9BZ97 58 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 PSENENQ9NZ42 101 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 IGHV3-11P01762 117 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 ZNF32P17041 273 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 TTC9CQ8N5M4 171 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 C2orf50Q96LR7 162 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 LINC00479Q96M42 142 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
XRN1-202ENST00000392981 LSM2Q9Y333 95 aaKnown RBP2.64□□□□□ -1.99
XRN1-202ENST00000392981 CACNA1IQ9P0X4 2223 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms