RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 IGLC1P0CG04 106 aa13.56□□□□□ -0.24
PDX1-201ENST00000381033 HINT1P49773 126 aaPredicted RBP13.56□□□□□ -0.24
PDX1-201ENST00000381033 BCL6BQ8N143 479 aaPredicted RBP13.56□□□□□ -0.24
PDX1-201ENST00000381033 UQCR10Q9UDW1 63 aa13.56□□□□□ -0.24
PDX1-201ENST00000381033 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 SPINK4O60575 86 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 IGLV2-8P01709 118 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 IGHV4-39P01824 125 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 PRB1P04280 392 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 LYZP61626 148 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 CX3CL1P78423 397 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 OR1L4Q8NGR5 311 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 RAX2Q96IS3 184 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 TRGV9Q99603 122 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 IGHV3OR16-10A0A075B7F0 116 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 NDUFA3O95167 84 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 GATA3P23771 443 aa13.55□□□□□ -0.24
PDX1-201ENST00000381033 SRP14P37108 136 aaKnown RBP13.55□□□□□ -0.24
PDX1-201ENST00000381033 A0A1B0GUS0 222 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 SH2D7A6NKC9 451 aaPredicted RBP13.54□□□□□ -0.24
PDX1-201ENST00000381033 IGKV1-17P01599 117 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 SLC35B1P78383 322 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 NPBQ8NG41 125 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 AJUBAQ96IF1 538 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 RNF5Q99942 180 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 C9JCJ5 164 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 CA1P00915 261 aaPredicted RBP13.54□□□□□ -0.24
PDX1-201ENST00000381033 MGST1P10620 155 aaKnown RBP13.54□□□□□ -0.24
PDX1-201ENST00000381033 CD99P14209 185 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 MS4A10Q96PG2 267 aa13.54□□□□□ -0.24
PDX1-201ENST00000381033 USP9YO00507 2555 aaPredicted RBP13.53□□□□□ -0.24
PDX1-201ENST00000381033 KCNIP4Q6PIL6 250 aa13.53□□□□□ -0.24
PDX1-201ENST00000381033 Q6ZN92 141 aa13.53□□□□□ -0.24
PDX1-201ENST00000381033 HYPMO75409 117 aa13.53□□□□□ -0.24
PDX1-201ENST00000381033 IMMP2LQ96T52 175 aa13.53□□□□□ -0.24
PDX1-201ENST00000381033 V9GYV3 84 aa13.53□□□□□ -0.24
PDX1-201ENST00000381033 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDX1-201ENST00000381033 ISLRO14498 428 aa13.52□□□□□ -0.24
PDX1-201ENST00000381033 FOXL1Q12952 345 aa13.52□□□□□ -0.24
PDX1-201ENST00000381033 ERASQ7Z444 233 aa13.52□□□□□ -0.24
PDX1-201ENST00000381033 IGF2BP2-AS1Q96M15 143 aa13.52□□□□□ -0.24
PDX1-201ENST00000381033 THYN1Q9P016 225 aa13.52□□□□□ -0.24
PDX1-201ENST00000381033 OVOL3O00110 214 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 TCL1AP56279 114 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 ACTL10Q5JWF8 245 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 Q71RC1 249 aaPredicted RBP13.52□□□□□ -0.25
PDX1-201ENST00000381033 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 FAM168AQ92567 244 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 NRGNQ92686 78 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 FANCD2OSQ96PS1 177 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 CDC42EP3Q9UKI2 254 aa13.52□□□□□ -0.25
PDX1-201ENST00000381033 SAA4P35542 130 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 RPL15P61313 204 aaKnown RBP13.51□□□□□ -0.25
PDX1-201ENST00000381033 AMMECR1LQ6DCA0 310 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 PERPQ96FX8 193 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 RASL11BQ9BPW5 248 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 ARL2-SNX15V9GYD0 113 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 PGPA6NDG6 321 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 CBLN1P23435 193 aa13.51□□□□□ -0.25
PDX1-201ENST00000381033 TYMSP04818 313 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 GP9P14770 177 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 Q8N6K4 173 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 C17orf77Q96MU5 243 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 HSPB9Q9BQS6 159 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 CSPG4Q6UVK1 2322 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 OR4B1Q8NGF8 309 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 ARPC1AQ92747 370 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 MRPS16Q9Y3D3 137 aaKnown RBP13.5□□□□□ -0.25
PDX1-201ENST00000381033 TRAPPC1Q9Y5R8 145 aa13.5□□□□□ -0.25
PDX1-201ENST00000381033 LINC01548A6NM66 108 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 MYCNOSP40205 109 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 ASCL2Q99929 193 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 SLC25A39Q9BZJ4 359 aaPredicted RBP13.49□□□□□ -0.25
PDX1-201ENST00000381033 IL36BQ9NZH7 164 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 IGHV3OR16-8A0A075B7F1 116 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 PEX7O00628 323 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 EGR2P11161 476 aaPredicted RBP13.49□□□□□ -0.25
PDX1-201ENST00000381033 SERTAD4Q9NUC0 356 aa13.49□□□□□ -0.25
PDX1-201ENST00000381033 SOX21Q9Y651 276 aaPredicted RBP13.49□□□□□ -0.25
PDX1-201ENST00000381033 IGHV3-35A0A0C4DH35 117 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 SLC25A5P05141 298 aaKnown RBP13.48□□□□□ -0.25
PDX1-201ENST00000381033 HIGD1AQ9Y241 93 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 IGHV7-81A0A0B4J1V7 117 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 F8W735 103 aaPredicted RBP13.48□□□□□ -0.25
PDX1-201ENST00000381033 GAGE5Q13069 117 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 GAGE6Q13070 117 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 PRR31Q5SQ13 230 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 EXOC3-AS1Q8N2X6 119 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 Q8N9W7 124 aa13.48□□□□□ -0.25
PDX1-201ENST00000381033 GRIFINA4D1Z8 144 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 F8WDY8 70 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 OR2J3O76001 311 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 SMIM17P0DL12 118 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 TRAV8-1A0A0A6YYK1 113 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 IL4P05112 153 aa13.47□□□□□ -0.25
PDX1-201ENST00000381033 ADMP35318 185 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms