RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
HMGN1-203ENST00000380748 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
HMGN1-203ENST00000380748 NPIPB6E9PJ23 425 aa11.69□□□□□ -0.54
HMGN1-203ENST00000380748 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
HMGN1-203ENST00000380748 PAIP2BQ9ULR5 123 aaKnown RBP11.69□□□□□ -0.54
HMGN1-203ENST00000380748 ICOSQ9Y6W8 199 aa11.69□□□□□ -0.54
HMGN1-203ENST00000380748 IAPPP10997 89 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
HMGN1-203ENST00000380748 DAZ2Q13117 558 aaKnown RBP11.68□□□□□ -0.54
HMGN1-203ENST00000380748 STEAP1BQ6NZ63 245 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 LYPD5Q6UWN5 251 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 LINC00528Q8N1L1 170 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 TMEM229BQ8NBD8 167 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 OR1S1Q8NH92 325 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 LY96Q9Y6Y9 160 aa11.68□□□□□ -0.54
HMGN1-203ENST00000380748 TRAV9-2A0A087WT02 112 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 A0A087X0K7 114 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 J3KRW8 73 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 PAX4O43316 350 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 TAS2R19P59542 299 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 RAB11AP62491 216 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 LYZL2Q7Z4W2 148 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 CCDC190Q86UF4 302 aa11.67□□□□□ -0.54
HMGN1-203ENST00000380748 FAM25AB3EWG3 89 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 FAM25CB3EWG5 89 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 FAM25GB3EWG6 89 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 S100A7P31151 101 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 SURF2Q15527 256 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-203ENST00000380748 WFDC10BQ8IUB3 73 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 LRRC20Q8TCA0 184 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-203ENST00000380748 YIPF6Q96EC8 236 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 GSN-AS1Q9NRJ2 163 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
HMGN1-203ENST00000380748 A0A0B4J2A0 478 aa11.65□□□□□ -0.54
HMGN1-203ENST00000380748 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.54
HMGN1-203ENST00000380748 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-203ENST00000380748 SHPKQ9UHJ6 478 aa11.65□□□□□ -0.54
HMGN1-203ENST00000380748 FUT9Q9Y231 359 aa11.65□□□□□ -0.54
HMGN1-203ENST00000380748 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
HMGN1-203ENST00000380748 TRGV1A0A0A0MS02 117 aa11.64□□□□□ -0.55
HMGN1-203ENST00000380748 TRAV12-3A0A0B4J271 114 aa11.64□□□□□ -0.55
HMGN1-203ENST00000380748 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
HMGN1-203ENST00000380748 C11orf72Q8NBR9 251 aa11.64□□□□□ -0.55
HMGN1-203ENST00000380748 IGHV3-53P01767 116 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 SNRPCP09234 159 aaKnown RBP11.63□□□□□ -0.55
HMGN1-203ENST00000380748 AKR1C4P17516 323 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 RAP2BP61225 183 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 NCS1P62166 190 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 AKR1C1Q04828 323 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 EXTL2Q9UBQ6 330 aa11.63□□□□□ -0.55
HMGN1-203ENST00000380748 LINC00854A0A1B0GVQ3 168 aa11.62□□□□□ -0.55
HMGN1-203ENST00000380748 HYPMO75409 117 aa11.62□□□□□ -0.55
HMGN1-203ENST00000380748 EVI2AP22794 236 aa11.62□□□□□ -0.55
HMGN1-203ENST00000380748 KCNIP3Q9Y2W7 256 aa11.62□□□□□ -0.55
HMGN1-203ENST00000380748 PMS2P5A8MQ11 134 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 DISC1C4P0D8 188 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 MRPS12O15235 138 aaKnown RBP11.61□□□□□ -0.55
HMGN1-203ENST00000380748 PITX3O75364 302 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 OR5G3P0C626 314 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 CYP2G1PQ6ZSU1 146 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 ACOT7LQ6ZUV0 252 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 NEGR1Q7Z3B1 354 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 Q8N814 137 aa11.61□□□□□ -0.55
HMGN1-203ENST00000380748 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-203ENST00000380748 K7EP13 123 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 PSCAO43653 123 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 PRAF2O60831 178 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 C1QBP02746 253 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 IL5P05113 134 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 LINC00869P0C866 280 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 CRYBA4P53673 196 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
HMGN1-203ENST00000380748 ZNF431Q8TF32 576 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-203ENST00000380748 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 C8orf49Q96NF6 230 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 Q9H521 79 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 PRO0255Q9UI72 69 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 KLF12Q9Y4X4 402 aa11.6□□□□□ -0.55
HMGN1-203ENST00000380748 SLC17A3O00476 420 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 OXTP01178 125 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 CRYGDP07320 174 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 CXCL2P19875 107 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 VBP1P61758 197 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 TEPPQ6URK8 271 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 Q6ZSA8 131 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 ZNF680Q8NEM1 530 aa11.59□□□□□ -0.55
HMGN1-203ENST00000380748 H3BTX0 84 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 SPINK4O60575 86 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 ANXA7P20073 488 aaKnown RBP11.58□□□□□ -0.56
HMGN1-203ENST00000380748 LEPP41159 167 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 PLP1P60201 277 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 LCN15Q6UWW0 184 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 PATE2Q6UY27 113 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-203ENST00000380748 OR51S1Q8NGJ8 323 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms