RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 IGHV3-73A0A0B4J1V6 119 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 E7EQL1 145 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 SAA4P35542 130 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 FXYD7P58549 80 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 CKS1BP61024 79 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 AMN1Q8IY45 258 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 CSTL1Q9H114 145 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 DOCK7Q96N67 2140 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 LY6HO94772 140 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 MST1LQ2TV78 715 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 DTX1Q86Y01 620 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
COL2A1-202ENST00000380518 ANK1P16157 1881 aa13□□□□□ -0.33
COL2A1-202ENST00000380518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.332e-9■■■□□ 16.7
COL2A1-202ENST00000380518 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 RASL10AQ92737 203 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 BPESC1Q9GZL8 116 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 ARTNQ5T4W7 220 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-202ENST00000380518 DAZ1Q9NQZ3 744 aaKnown RBP12.99□□□□□ -0.33
COL2A1-202ENST00000380518 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
COL2A1-202ENST00000380518 MPV17L2Q567V2 206 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 VGLL1Q99990 258 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 TMEM14BQ9NUH8 114 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 NAA38Q9BRA0 125 aaKnown RBP12.98□□□□□ -0.33
COL2A1-202ENST00000380518 JPT2Q9H910 190 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 SLC25A16P16260 332 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 C1QTNF4Q9BXJ3 329 aa12.98□□□□□ -0.33
COL2A1-202ENST00000380518 A0A087X0K7 114 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 DLEU1O43261 78 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 NCOR1P1Q9H4R4 102 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 ARFGEF3Q5TH69 2177 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 OVOL3O00110 214 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 INSP01308 110 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 GATA4P43694 442 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF124Q15973 351 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 C9JQL5 133 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 PAX4O43316 350 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 TDGF1P3P51864 188 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
COL2A1-202ENST00000380518 Q0VG73 95 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 ZNF492Q9P255 531 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 FAM231BA6NCW3 169 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 LIME1Q9H400 295 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
COL2A1-202ENST00000380518 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.33
COL2A1-202ENST00000380518 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.33
COL2A1-202ENST00000380518 NDUFB8O95169 186 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 Q8TCH9 128 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 C1orf159Q96HA4 380 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 ANAPC13Q9BS18 74 aa12.96□□□□□ -0.34
COL2A1-202ENST00000380518 DEFB104AQ8WTQ1 72 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-202ENST00000380518 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 RIPPLY3P57055 190 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 KLHL30-AS1Q8NEE0 82 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 CST9LQ9H4G1 147 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 TRPM7Q96QT4 1865 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
COL2A1-202ENST00000380518 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 DOCK8Q8NF50 2099 aa12.95□□□□□ -0.34
COL2A1-202ENST00000380518 TCF20Q9UGU0 1960 aaKnown RBP12.94□□□□□ -0.34
COL2A1-202ENST00000380518 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 UBE2E1P51965 193 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 FAM110DQ8TAY7 271 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-202ENST00000380518 PAX9P55771 341 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 CT83Q5H943 113 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 NDUFS8O00217 210 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 NPC2P61916 151 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 ERCC8Q13216 396 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
COL2A1-202ENST00000380518 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 Q6ZR03 302 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 LY6G5BQ8NDX9 201 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 VWA8A3KMH1 1905 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 A0A087WWL8 130 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-202ENST00000380518 PROK2Q9HC23 129 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-202ENST00000380518 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
COL2A1-202ENST00000380518 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 PCNX1Q96RV3 2341 aa12.93□□□□□ -0.34
COL2A1-202ENST00000380518 GAGE2BQ13066 116 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 RNF166Q96A37 237 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-202ENST00000380518 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 SYNJ2BPP57105 145 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 UBE2E2Q96LR5 201 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms