RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 RNF24Q9Y225 148 aa14.95□□□□□ -0.02
VSX1-201ENST00000376707 HERC2O95714 4834 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 FAM25EA8MYX2 175 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 L7N2F9 121 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 AGPAT2O15120 278 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 VAMP2P63027 116 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 S100ZQ8WXG8 99 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 ARV1Q9H2C2 271 aa14.94□□□□□ -0.02
VSX1-201ENST00000376707 FAM240BA0A1B0GVZ2 78 aa14.93□□□□□ -0.02
VSX1-201ENST00000376707 C5orf51A6NDU8 294 aa14.93□□□□□ -0.02
VSX1-201ENST00000376707 GOSR2O14653 212 aa14.93□□□□□ -0.02
VSX1-201ENST00000376707 MRPS12O15235 138 aaKnown RBP14.93□□□□□ -0.02
VSX1-201ENST00000376707 LRRC20Q8TCA0 184 aa14.93□□□□□ -0.02
VSX1-201ENST00000376707 C2orf50Q96LR7 162 aa14.93□□□□□ -0.02
VSX1-201ENST00000376707 MGST2Q99735 147 aa14.93□□□□□ -0.02
VSX1-201ENST00000376707 LSM5Q9Y4Y9 91 aaKnown RBP14.93□□□□□ -0.02
VSX1-201ENST00000376707 ZNF705GA8MUZ8 300 aaPredicted RBP14.92□□□□□ -0.02
VSX1-201ENST00000376707 CRXO43186 299 aaPredicted RBP14.92□□□□□ -0.02
VSX1-201ENST00000376707 CXCL3P19876 107 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 B2MP61769 119 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 IL15RAQ13261 267 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 ASAH1Q13510 395 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 LGALS9BQ3B8N2 356 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 BAP18Q8IXM2 172 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 PPP1R14DQ9NXH3 145 aa14.92□□□□□ -0.02
VSX1-201ENST00000376707 IGLV2-18A0A075B6J9 118 aa14.91□□□□□ -0.02
VSX1-201ENST00000376707 BOLA2-SMG1P6H3BVE0 249 aa14.91□□□□□ -0.02
VSX1-201ENST00000376707 RHOBP62745 196 aa14.91□□□□□ -0.02
VSX1-201ENST00000376707 HIST1H1AQ02539 215 aaPredicted RBP14.91□□□□□ -0.02
VSX1-201ENST00000376707 MZT2BQ6NZ67 158 aa14.91□□□□□ -0.02
VSX1-201ENST00000376707 TMEM88Q6PEY1 159 aa14.91□□□□□ -0.02
VSX1-201ENST00000376707 TRAV12-2A0A075B6T6 113 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 PRSS29PA6NIE9 313 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 LYRM9A8MSI8 78 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 PRM2P04554 102 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 BCAP31P51572 246 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 CAV2P51636 162 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 PSG3Q16557 428 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 LINC00305Q7Z4B0 112 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 OR8A1Q8NGG7 326 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 KRTAP17-1Q9BYP8 105 aa14.9□□□□□ -0.02
VSX1-201ENST00000376707 RTL8CO15255 209 aa14.89□□□□□ -0.03
VSX1-201ENST00000376707 CST7O76096 145 aa14.89□□□□□ -0.03
VSX1-201ENST00000376707 CXCL2P19875 107 aa14.89□□□□□ -0.03
VSX1-201ENST00000376707 PVALBP20472 110 aaPredicted RBP14.89□□□□□ -0.03
VSX1-201ENST00000376707 VWC2Q2TAL6 325 aa14.89□□□□□ -0.03
VSX1-201ENST00000376707 RNF212Q495C1 297 aa14.89□□□□□ -0.03
VSX1-201ENST00000376707 TMEM37Q8WXS4 190 aa14.89□□□□□ -0.03
VSX1-201ENST00000376707 LYRM2Q9NU23 88 aaPredicted RBP14.89□□□□□ -0.03
VSX1-201ENST00000376707 A0A1B0GVY2 172 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 FAM24AA6NFZ4 105 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 DEFB130BP0DP73 79 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 DEFB130AP0DP74 79 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 TSPOP30536 169 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 CAMLGP49069 296 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 RAB31Q13636 194 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 LCN15Q6UWW0 184 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 UQCC1Q9NVA1 299 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 WDR83OSQ9Y284 106 aa14.88□□□□□ -0.03
VSX1-201ENST00000376707 COX7A2P2O60397 106 aa14.87□□□□□ -0.03
VSX1-201ENST00000376707 SULT1A1P50225 295 aa14.87□□□□□ -0.03
VSX1-201ENST00000376707 BPIFA4PQ86YQ2 179 aa14.87□□□□□ -0.03
VSX1-201ENST00000376707 C15orf53Q8NAA6 179 aa14.87□□□□□ -0.03
VSX1-201ENST00000376707 RPUSD4Q96CM3 377 aaKnown RBP14.87□□□□□ -0.03
VSX1-201ENST00000376707 LINC01587Q99440 93 aa14.87□□□□□ -0.03
VSX1-201ENST00000376707 ZNF331Q9NQX6 463 aaPredicted RBP14.87□□□□□ -0.03
VSX1-201ENST00000376707 A6NHS1 94 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 AZU1P20160 251 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 S100A11P31949 105 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 S100A10P60903 97 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 RAB32Q13637 225 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 C10orf113Q5VZT2 155 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 NRARPQ7Z6K4 114 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 TMEM256Q8N2U0 113 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 TMEM252Q8N6L7 170 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 SLC50A1Q9BRV3 221 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 DNAJC4Q9NNZ3 241 aa14.86□□□□□ -0.03
VSX1-201ENST00000376707 IGSF23A1L1A6 192 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 UPK1BO75841 260 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 PRB4P10163 310 aaPredicted RBP14.85□□□□□ -0.03
VSX1-201ENST00000376707 OPCMLQ14982 345 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 MORN5Q5VZ52 161 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 Q6ZR54 194 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 Q6ZRG5 221 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 CHAC2Q8WUX2 184 aa14.85□□□□□ -0.03
VSX1-201ENST00000376707 SNRPCP09234 159 aaKnown RBP14.84□□□□□ -0.03
VSX1-201ENST00000376707 IGLC2P0DOY2 106 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 HTN1P15515 57 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 TAS2R60P59551 318 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 SOHLH1Q5JUK2 328 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 MIC13Q5XKP0 118 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 STX12Q86Y82 276 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 ENKURQ8TC29 256 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 ATG101Q9BSB4 218 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 KIAA1109Q2LD37 5005 aa14.84□□□□□ -0.03
VSX1-201ENST00000376707 FAT2Q9NYQ8 4349 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 DNAH2Q9P225 4427 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 PLAC8L1A1L4L8 177 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 F5H768 121 aa14.83□□□□□ -0.04
VSX1-201ENST00000376707 CDKN1BP46527 198 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms