RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 IGFL2Q6UWQ7 119 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 SIGLEC15Q6ZMC9 328 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 OR9G4Q8NGQ1 327 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 M0R3E3 92 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 C3orf36Q3SXR2 165 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 ABHD17AQ96GS6 310 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
TRIM39-201ENST00000376656 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 TEX22C9J3V5 150 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 TM4SF20Q53R12 229 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 WFDC3Q8IUB2 231 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 RASL11BQ9BPW5 248 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 A0A1W2PPM0 123 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 CRYGBP07316 175 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 FAM104BQ5XKR9 115 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 ZNF414Q96IQ9 312 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 JKAMPQ9P055 326 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 CTSZQ9UBR2 303 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 SIGLEC9Q9Y336 463 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 SPCS1Q9Y6A9 102 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 U3KQK5 164 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 KALRNO60229 2985 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
TRIM39-201ENST00000376656 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 IGKV1-17P01599 117 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 C8orf31Q8N9H6 132 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 NDUFB3O43676 98 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 DLX6P56179 175 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 Q6AWC8 147 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 HBDP02042 147 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 PAX8Q06710 450 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
TRIM39-201ENST00000376656 ORMDL3Q8N138 153 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 CCL17Q92583 94 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
TRIM39-201ENST00000376656 C17orf100A8MU93 164 aa13.02□□□□□ -0.32
TRIM39-201ENST00000376656 I3L2K1 104 aa13.02□□□□□ -0.32
TRIM39-201ENST00000376656 LOXP28300 417 aaPredicted RBP13.02□□□□□ -0.32
TRIM39-201ENST00000376656 IFI27L1Q96BM0 104 aa13.02□□□□□ -0.32
TRIM39-201ENST00000376656 NPFFR1Q9GZQ6 430 aa13.02□□□□□ -0.32
TRIM39-201ENST00000376656 DKK2Q9UBU2 259 aa13.02□□□□□ -0.32
TRIM39-201ENST00000376656 K7EQM0 130 aa13.02□□□□□ -0.33
TRIM39-201ENST00000376656 SIVA1O15304 175 aa13.02□□□□□ -0.33
TRIM39-201ENST00000376656 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.33
TRIM39-201ENST00000376656 DMXL2Q8TDJ6 3036 aa13.02□□□□□ -0.33
TRIM39-201ENST00000376656 IGHV1-8P0DP01 117 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 RBPJQ06330 500 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 ZZEF1O43149 2961 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 TMEM178BH3BS89 294 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 FBXL15Q9H469 300 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 PKDREJQ9NTG1 2253 aa13.01□□□□□ -0.33
TRIM39-201ENST00000376656 H3BRN7 92 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 NPYP01303 97 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 CT45A10P0DMU9 189 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 PPP1R27Q86WC6 154 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 TMEM189A5PLL7 270 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 NDUFS7O75251 213 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 ADIPOQQ15848 244 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 COL25A1Q9BXS0 654 aaPredicted RBP13□□□□□ -0.33
TRIM39-201ENST00000376656 TMEM155Q4W5P6 130 aa13□□□□□ -0.33
TRIM39-201ENST00000376656 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
TRIM39-201ENST00000376656 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
TRIM39-201ENST00000376656 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
TRIM39-201ENST00000376656 SH2D1AO60880 128 aa12.99□□□□□ -0.33
TRIM39-201ENST00000376656 BCL6BQ8N143 479 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-201ENST00000376656 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
TRIM39-201ENST00000376656 C18orf15Q96N68 181 aa12.99□□□□□ -0.33
TRIM39-201ENST00000376656 TTTY13Q9BZ97 58 aa12.99□□□□□ -0.33
TRIM39-201ENST00000376656 MRPS12O15235 138 aaKnown RBP12.98□□□□□ -0.33
TRIM39-201ENST00000376656 NUP37Q8NFH4 326 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 FABP2P12104 132 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 CKS2P33552 79 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 IGKV2D-26A0A0A0MRZ7 120 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 K7EM74 188 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 FCGR2BP31994 310 aaPredicted RBP12.98□□□□□ -0.33
TRIM39-201ENST00000376656 DEFB109BQ30KR1 87 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 ZNF491Q8N8L2 437 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
TRIM39-201ENST00000376656 WI2-2373I1.2A0A1W2PRP0 233 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 IL4P05112 153 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 GCSHP23434 173 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 FXYD2P54710 66 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 PLA2G2CQ5R387 149 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 S4R3C0 116 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 ZNF318Q5VUA4 2279 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 K7EIM0 57 aa12.97□□□□□ -0.33
TRIM39-201ENST00000376656 IGHV1-3A0A0C4DH29 117 aa12.96□□□□□ -0.33
TRIM39-201ENST00000376656 C1orf185Q5T7R7 199 aa12.96□□□□□ -0.33
TRIM39-201ENST00000376656 SMIM13P0DJ93 91 aa12.96□□□□□ -0.33
TRIM39-201ENST00000376656 RNF125Q96EQ8 232 aa12.96□□□□□ -0.33
TRIM39-201ENST00000376656 SH3BGRL2Q9UJC5 107 aa12.96□□□□□ -0.33
TRIM39-201ENST00000376656 K7ERJ3 54 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms