RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 C4BPBP20851 252 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 TAS2R45P59539 299 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 TMEM41BQ5BJD5 291 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 APRG1Q8IVJ8 170 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 BAP18Q8IXM2 172 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 C9orf62Q8N4C0 152 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 RPP25LQ8N5L8 163 aaKnown RBP8.42□□□□□ -1.06
HSPG2-202ENST00000374676 STOML3Q8TAV4 291 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
HSPG2-202ENST00000374676 CITED4Q96RK1 184 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 OR51M1Q9H341 326 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 RPRMQ9NS64 109 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 CLEC5AQ9NY25 188 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 COL7A1Q02388 2944 aa8.42□□□□□ -1.06
HSPG2-202ENST00000374676 PYYP10082 97 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 TPT1P13693 172 aaKnown RBP8.41□□□□□ -1.06
HSPG2-202ENST00000374676 CDC34P49427 236 aaPredicted RBP8.41□□□□□ -1.06
HSPG2-202ENST00000374676 PDE6HQ13956 83 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 KHDC3LQ587J8 217 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 FAM122CQ6P4D5 195 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 PQLC2Q6ZP29 291 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 LRRC20Q8TCA0 184 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 RNF141Q8WVD5 230 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 LINC00052Q96N35 136 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 SLC50A1Q9BRV3 221 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 PAXXQ9BUH6 204 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 ACTR3CQ9C0K3 210 aaPredicted RBP8.41□□□□□ -1.06
HSPG2-202ENST00000374676 ZNF331Q9NQX6 463 aaPredicted RBP8.41□□□□□ -1.06
HSPG2-202ENST00000374676 ZNF586Q9NXT0 402 aa8.41□□□□□ -1.06
HSPG2-202ENST00000374676 TRBV19A0A075B6N1 114 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 LOC102724200A0A096LPH7 203 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-202ENST00000374676 RBMY1BA6NDE4 496 aaKnown RBP8.4□□□□□ -1.06
HSPG2-202ENST00000374676 RBMY1EA6NEQ0 496 aaKnown RBP8.4□□□□□ -1.06
HSPG2-202ENST00000374676 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 RBMY1DP0C7P1 496 aaKnown RBP8.4□□□□□ -1.06
HSPG2-202ENST00000374676 STAG3L2P0CL84 134 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 STAG3L3P0CL85 134 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 ZNF124Q15973 351 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 PSG3Q16557 428 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 FXYD5Q96DB9 178 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 ZNF503Q96F45 646 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 C20orf173Q96LM9 149 aa8.4□□□□□ -1.06
HSPG2-202ENST00000374676 TENM3Q9P273 2699 aa8.4□□□□□ -1.07
HSPG2-202ENST00000374676 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 CTXND1A0A1B0GTU2 59 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 UMAD1C9J7I0 102 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 OR7C2O60412 319 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 NDUFB4O95168 129 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 SNRPCP09234 159 aaKnown RBP8.39□□□□□ -1.07
HSPG2-202ENST00000374676 PSG9Q00887 426 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
HSPG2-202ENST00000374676 KIR2DL5BA0A0G2JN68 375 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 KIR2DL5BA0A0G2JPC4 375 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 KNCNA6PVL3 124 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 H3BTX0 84 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 SLC17A3O00476 420 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 HLA-DRB4P13762 266 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 HAGHQ16775 308 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 EIF5AL1Q6IS14 154 aaKnown RBP8.38□□□□□ -1.07
HSPG2-202ENST00000374676 STHQ8IWL8 128 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 KIR2DL5AQ8N109 375 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 KIR2DL5BQ8NHK3 375 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 CLUHP3Q96NS8 147 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 SAV1Q9H4B6 383 aaPredicted RBP8.38□□□□□ -1.07
HSPG2-202ENST00000374676 PRELID1Q9Y255 219 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 HLA-DRB4X5D2U9 266 aa8.38□□□□□ -1.07
HSPG2-202ENST00000374676 A0A0J9YX75 114 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 H3BMM0 161 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
HSPG2-202ENST00000374676 OR10J4P0C629 311 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 NHLRC4P0CG21 123 aaPredicted RBP8.37□□□□□ -1.07
HSPG2-202ENST00000374676 HLA-DMBP28068 263 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 APOC4P55056 127 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 UBE2L3P68036 154 aaKnown RBP8.37□□□□□ -1.07
HSPG2-202ENST00000374676 ZNF726P1Q15940 193 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 EBLN2Q6P2I7 272 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 TRPT1Q86TN4 253 aaKnown RBP8.37□□□□□ -1.07
HSPG2-202ENST00000374676 SBSPONQ8IVN8 264 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 RNF182Q8N6D2 247 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
HSPG2-202ENST00000374676 MRPL53Q96EL3 112 aaKnown RBP8.37□□□□□ -1.07
HSPG2-202ENST00000374676 A8MTW9 85 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 UBE2CO00762 179 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 HMGB3O15347 200 aaKnown RBP8.36□□□□□ -1.07
HSPG2-202ENST00000374676 CXorf1O96002 111 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 ARL14EPLP0DKL9 152 aa8.36□□□□□ -1.07
HSPG2-202ENST00000374676 RPL35AP18077 110 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms