RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RAX2Q96IS3 184 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 GEMIN7Q9H840 131 aaKnown RBP14.01□□□□□ -0.17
PTPRU-202ENST00000373779 IGLL1P15814 213 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 EP300Q09472 2414 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-202ENST00000373779 IGHV1-24A0A0C4DH33 117 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 IGLV3-9A0A075B6K5 115 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 OOSP1A8MZH6 123 aa14.01□□□□□ -0.17
PTPRU-202ENST00000373779 CIRBPQ14011 172 aaKnown RBP14.01□□□□□ -0.17
PTPRU-202ENST00000373779 PAX8Q06710 450 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 IGFL4Q6B9Z1 124 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 CYSLTR1Q9Y271 337 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 THAP8Q8NA92 274 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 KIR3DS1Q14943 382 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 MUC22E2RYF6 1773 aaPredicted RBP14□□□□□ -0.17
PTPRU-202ENST00000373779 ROS1P08922 2347 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 C19orf54Q5BKX5 351 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 MINOS1Q5TGZ0 78 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 MTURNQ8N3F0 131 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 LINC00311Q8N616 119 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 MINOS1-NBL1R4GNA1 71 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
PTPRU-202ENST00000373779 M0R1W7 72 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 HOXA3O43365 443 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-202ENST00000373779 COL8A2P25067 703 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 NPFFO15130 113 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 TPSG1Q9NRR2 321 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 HAX1O00165 279 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 NUPR1O60356 82 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 E7EQL1 145 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 SMAD7O15105 426 aaKnown RBP13.99□□□□□ -0.17
PTPRU-202ENST00000373779 ZNF815PA8K554 130 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 OVOL1O14753 267 aa13.99□□□□□ -0.17
PTPRU-202ENST00000373779 IGHV3OR16-12A0A075B7B8 117 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 CD7P09564 240 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 TMEM213A2RRL7 107 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 SSBP2P81877 361 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-202ENST00000373779 TNFRSF18Q9Y5U5 241 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 SELENOKQ9Y6D0 94 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 GAGE12BA1L429 117 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 UBE2L6O14933 153 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 CRXO43186 299 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-202ENST00000373779 TMEM158Q8WZ71 300 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 JMJD8Q96S16 334 aa13.98□□□□□ -0.17
PTPRU-202ENST00000373779 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-202ENST00000373779 C8orf49Q96NF6 230 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 TGFAP01135 160 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 Q6ZPA2 131 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 STPG4Q8N801 248 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 SFTA2Q6UW10 78 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 WIPF2Q8TF74 440 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-202ENST00000373779 COPS9Q8WXC6 57 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 FAM168AQ92567 244 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 TMEM14CQ9P0S9 112 aa13.97□□□□□ -0.17
PTPRU-202ENST00000373779 DIAPH2-AS1Q14236 149 aa13.96□□□□□ -0.17
PTPRU-202ENST00000373779 TTC32Q5I0X7 151 aa13.96□□□□□ -0.17
PTPRU-202ENST00000373779 ODF3L1Q8IXM7 274 aa13.96□□□□□ -0.17
PTPRU-202ENST00000373779 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
PTPRU-202ENST00000373779 FAM104BQ5XKR9 115 aa13.96□□□□□ -0.17
PTPRU-202ENST00000373779 NCOA6Q14686 2063 aaPredicted RBP13.96□□□□□ -0.18
PTPRU-202ENST00000373779 PRSS46E5RG02 174 aa13.96□□□□□ -0.18
PTPRU-202ENST00000373779 LINC00527Q9UJ94 153 aa13.95□□□□□ -0.18
PTPRU-202ENST00000373779 PLNP26678 52 aa13.95□□□□□ -0.18
PTPRU-202ENST00000373779 C7orf69Q9H7B7 122 aa13.95□□□□□ -0.18
PTPRU-202ENST00000373779 ZC2HC1BQ5TFG8 222 aa13.95□□□□□ -0.18
PTPRU-202ENST00000373779 MEIG1Q5JSS6 88 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 APC2O95996 2303 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 MAJINQ3KP22 176 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 GAGE13Q4V321 117 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 SIGMAR1Q99720 223 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 KLF5Q13887 457 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-202ENST00000373779 ERCC8Q13216 396 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 VCX2Q9H322 139 aa13.94□□□□□ -0.18
PTPRU-202ENST00000373779 TNFRSF6BO95407 300 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 CEACAM8P31997 349 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-202ENST00000373779 CD300EQ496F6 205 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-202ENST00000373779 NPFFR1Q9GZQ6 430 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 MOB4Q9Y3A3 225 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 C9orf139Q6ZV77 190 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 DOCK10Q96BY6 2186 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 KMT2EQ8IZD2 1858 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 H3BRN7 92 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 LTAP01374 205 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 CHAC1Q9BUX1 264 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
PTPRU-202ENST00000373779 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 FAM215AQ9Y5M1 114 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 NDPQ00604 133 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 IGFL3Q6UXB1 125 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 ZC2HC1AQ96GY0 325 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 LINC01549A6NIU2 74 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 LY6HO94772 140 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 PRTN3P24158 256 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 SPRNQ5BIV9 151 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 CST9LQ9H4G1 147 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 PCNX3Q9H6A9 2034 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 MRAP2Q96G30 205 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 DUX3Q96PT4 197 aa13.92□□□□□ -0.18
PTPRU-202ENST00000373779 IGLC1P0CG04 106 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms