RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 LINC00305Q7Z4B0 112 aa15.49■□□□□ 0.07
CCDC28B-201ENST00000373602 CST7O76096 145 aa15.48■□□□□ 0.07
CCDC28B-201ENST00000373602 PVALBP20472 110 aaPredicted RBP15.48■□□□□ 0.07
CCDC28B-201ENST00000373602 ASAH1Q13510 395 aa15.48■□□□□ 0.07
CCDC28B-201ENST00000373602 LRRC20Q8TCA0 184 aa15.48■□□□□ 0.07
CCDC28B-201ENST00000373602 TMEM37Q8WXS4 190 aa15.48■□□□□ 0.07
CCDC28B-201ENST00000373602 M0R2Z0 102 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 COX7A2P2O60397 106 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 CXCL2P19875 107 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 CAMLGP49069 296 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 RAB31Q13636 194 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 OXA1LQ15070 435 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 OR8A1Q8NGG7 326 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 NIPSNAP3BQ9BS92 247 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 TMEM208Q9BTX3 173 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 NDUFAF3Q9BU61 184 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 YTHDF2Q9Y5A9 579 aaKnown RBP15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 DNAH10Q8IVF4 4471 aa15.47■□□□□ 0.07
CCDC28B-201ENST00000373602 INSP01308 110 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 S100A10P60903 97 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 HIST1H1AQ02539 215 aaPredicted RBP15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 VWC2Q2TAL6 325 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 LCN15Q6UWW0 184 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 BPIFA4PQ86YQ2 179 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 LYRM2Q9NU23 88 aaPredicted RBP15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 UQCC1Q9NVA1 299 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 PLA2G2EQ9NZK7 142 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 WDR83OSQ9Y284 106 aa15.46■□□□□ 0.07
CCDC28B-201ENST00000373602 DNAH6Q9C0G6 4158 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 BOLA2-SMG1P6H3BVE0 249 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 SULT1A1P50225 295 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 RAB32Q13637 225 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 MORN5Q5VZ52 161 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 C10orf113Q5VZT2 155 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 NRARPQ7Z6K4 114 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 SLC50A1Q9BRV3 221 aa15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 ZNF331Q9NQX6 463 aaPredicted RBP15.45■□□□□ 0.06
CCDC28B-201ENST00000373602 B2MP61769 119 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 OPCMLQ14982 345 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 MIC13Q5XKP0 118 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 Q6ZRG5 221 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 BAP18Q8IXM2 172 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 TMEM252Q8N6L7 170 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 RPUSD4Q96CM3 377 aaKnown RBP15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 FAM210BQ96KR6 192 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 DNAJC4Q9NNZ3 241 aa15.44■□□□□ 0.06
CCDC28B-201ENST00000373602 IGSF23A1L1A6 192 aa15.43■□□□□ 0.06
CCDC28B-201ENST00000373602 S100A11P31949 105 aa15.43■□□□□ 0.06
CCDC28B-201ENST00000373602 RHOBP62745 196 aa15.43■□□□□ 0.06
CCDC28B-201ENST00000373602 TRAV12-2A0A075B6T6 113 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 ZNF705GA8MUZ8 300 aaPredicted RBP15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 UPK1BO75841 260 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 PRM2P04554 102 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 SNRPCP09234 159 aaKnown RBP15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 P0DMU3 169 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 FAM231AP0DMU4 169 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 FAM231CP0DMU5 169 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 IGLC2P0DOY2 106 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 STX12Q86Y82 276 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 OR1L4Q8NGR5 311 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 PPP1R14DQ9NXH3 145 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 FRAS1Q86XX4 4008 aa15.42■□□□□ 0.06
CCDC28B-201ENST00000373602 A6NHS1 94 aa15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 PRB4P10163 310 aaPredicted RBP15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 TSPOP30536 169 aa15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 RPL29P47914 159 aaKnown RBP15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 POM121L12Q8N7R1 296 aa15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 ENKURQ8TC29 256 aa15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 CHAC2Q8WUX2 184 aa15.41■□□□□ 0.06
CCDC28B-201ENST00000373602 UBE2L5PA0A1B0GUS4 154 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 SLC17A3O00476 420 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 DAD1P61803 113 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 HBG1P69891 147 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 HBG2P69892 147 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 BAXQ07812 192 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 ATP6V1FQ16864 119 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 SAT2Q96F10 170 aaPredicted RBP15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 PFDN5Q99471 154 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 GPN1Q9HCN4 374 aaPredicted RBP15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 SLC39A9Q9NUM3 307 aa15.4■□□□□ 0.06
CCDC28B-201ENST00000373602 TRAV5A0A0B4J249 113 aa15.39■□□□□ 0.05
CCDC28B-201ENST00000373602 H3BQ15 152 aa15.39■□□□□ 0.05
CCDC28B-201ENST00000373602 H3BTX0 84 aa15.39■□□□□ 0.05
CCDC28B-201ENST00000373602 IFITM3Q01628 133 aa15.39■□□□□ 0.05
CCDC28B-201ENST00000373602 TMEM256Q8N2U0 113 aa15.39■□□□□ 0.05
CCDC28B-201ENST00000373602 PXMP4Q9Y6I8 212 aa15.39■□□□□ 0.05
CCDC28B-201ENST00000373602 LYRM9A8MSI8 78 aa15.38■□□□□ 0.05
CCDC28B-201ENST00000373602 HTN3P15516 51 aa15.38■□□□□ 0.05
CCDC28B-201ENST00000373602 AZU1P20160 251 aa15.38■□□□□ 0.05
CCDC28B-201ENST00000373602 CDKN1BP46527 198 aa15.38■□□□□ 0.05
CCDC28B-201ENST00000373602 LINC01587Q99440 93 aa15.38■□□□□ 0.05
CCDC28B-201ENST00000373602 PLAC8L1A1L4L8 177 aa15.37■□□□□ 0.05
CCDC28B-201ENST00000373602 PRAC2D3DTV9 90 aa15.37■□□□□ 0.05
CCDC28B-201ENST00000373602 FGF7P21781 194 aa15.37■□□□□ 0.05
CCDC28B-201ENST00000373602 TAS2R60P59551 318 aa15.37■□□□□ 0.05
CCDC28B-201ENST00000373602 GUK1Q16774 197 aa15.37■□□□□ 0.05
CCDC28B-201ENST00000373602 PTTG2Q9NZH5 202 aa15.37■□□□□ 0.05
CCDC28B-201ENST00000373602 SIX6O95475 246 aa15.36■□□□□ 0.05
CCDC28B-201ENST00000373602 NMES1Q9C002 83 aa15.36■□□□□ 0.05
CCDC28B-201ENST00000373602 PRAF2O60831 178 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms