RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 APCSP02743 223 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 GZMBP10144 247 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 CSN1S1P47710 185 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 PKIAP61925 76 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 ZNF414Q96IQ9 312 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 MOB4Q9Y3A3 225 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 IGHV4-30-2A0A087WSY4 118 aa10.96□□□□□ -0.65
USF1-202ENST00000368020 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
USF1-202ENST00000368020 MRPL54Q6P161 138 aaKnown RBP10.96□□□□□ -0.65
USF1-202ENST00000368020 GOLT1AQ6ZVE7 132 aa10.96□□□□□ -0.65
USF1-202ENST00000368020 NEU1Q99519 415 aa10.96□□□□□ -0.65
USF1-202ENST00000368020 SETXQ7Z333 2677 aaKnown RBP10.96□□□□□ -0.65
USF1-202ENST00000368020 PDZD2O15018 2839 aa10.96□□□□□ -0.66
USF1-202ENST00000368020 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 NPIPB6E9PJ23 425 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 CTSGP08311 255 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 SNRPCP09234 159 aaKnown RBP10.95□□□□□ -0.66
USF1-202ENST00000368020 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 C5orf56Q8N8D9 126 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 ZNF502Q8TBZ5 544 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 PRDM13Q9H4Q3 707 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.95□□□□□ -0.662e-8■■■■■ 31.6
USF1-202ENST00000368020 ASH1LQ9NR48 2969 aaKnown RBP10.95□□□□□ -0.66
USF1-202ENST00000368020 GRIFINA4D1Z8 144 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 OR2T8A6NH00 312 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 CRIP2P52943 208 aaPredicted RBP10.95□□□□□ -0.66
USF1-202ENST00000368020 PSG3Q16557 428 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 TMEM256Q8N2U0 113 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 EXOC3-AS1Q8N2X6 119 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 EEF1AKMT3Q96AZ1 226 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 FOXC2Q99958 501 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 HSPB9Q9BQS6 159 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 MEGF9Q9H1U4 602 aa10.95□□□□□ -0.66
USF1-202ENST00000368020 LINC00587B1AMM8 73 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 H3BTX0 84 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 SPINK4O60575 86 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 CA1P00915 261 aaPredicted RBP10.94□□□□□ -0.66
USF1-202ENST00000368020 IGLV2-11P01706 119 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 HBBP68871 147 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 SLC35B1P78383 322 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 RHOGP84095 191 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 ECSCRQ19T08 205 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 Q5PR19 223 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 FAM162BQ5T6X4 162 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 RBPMS2Q6ZRY4 209 aaKnown RBP10.94□□□□□ -0.66
USF1-202ENST00000368020 PRNTQ86SH4 94 aa10.94□□□□□ -0.66
USF1-202ENST00000368020 IGHV4-61A0A0C4DH41 118 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 FAM223BA6NKX1 122 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 DIRC3C9JPN6 131 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 M0QZK8 103 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 SERF1AO75920 110 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 GATA3P23771 443 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 Q6AWC8 147 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 FAM223AQ8IWN6 122 aa10.93□□□□□ -0.66
USF1-202ENST00000368020 A0A1B0GXF2 115 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 CT45A10P0DMU9 189 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 RELQ04864 619 aaPredicted RBP10.92□□□□□ -0.66
USF1-202ENST00000368020 KRTAP1-3Q8IUG1 177 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 CIARTQ8N365 385 aaPredicted RBP10.92□□□□□ -0.66
USF1-202ENST00000368020 KCNS1Q96KK3 526 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 SAMD10Q9BYL1 202 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 GNB4Q9HAV0 340 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 PSG8Q9UQ74 426 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 S4R3C0 116 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 MYO9AB2RTY4 2548 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 A0A096LNT2 108 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 A0A1B0GW15 77 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 SRIP30626 198 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 LOXL1Q08397 574 aaPredicted RBP10.92□□□□□ -0.66
USF1-202ENST00000368020 SAPCD1Q5SSQ6 148 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 C1orf194Q5T5A4 169 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 C16orf54Q6UWD8 224 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 SIGLECL1Q8N7X8 197 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 SGK494Q96LW2 274 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 NOL4LQ96MY1 436 aaPredicted RBP10.92□□□□□ -0.66
USF1-202ENST00000368020 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
USF1-202ENST00000368020 NBPF19A0A087WUL8 3843 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 A0A087X0K7 114 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 TRAV40A0A0B4J280 105 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 BRI3O95415 125 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 MSMBP08118 114 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 GPR183P32249 361 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 FOXA3P55318 350 aaPredicted RBP10.91□□□□□ -0.66
USF1-202ENST00000368020 CYB5R2Q6BCY4 276 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 TP53TG3Q9ULZ0 132 aa10.91□□□□□ -0.66
USF1-202ENST00000368020 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 H3BUA1 57 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 FRMD6-AS1P0C7T7 363 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 KLF5Q13887 457 aaPredicted RBP10.9□□□□□ -0.66
USF1-202ENST00000368020 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 CDPF1Q6NVV7 123 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 COX8CQ7Z4L0 72 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 C17orf77Q96MU5 243 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.66
USF1-202ENST00000368020 ITPR3Q14573 2671 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms