RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PET100P0DJ07 73 aa17.32■□□□□ 0.36
PFDN2-201ENST00000368010 RBMY1A1P0DJD3 496 aaKnown RBP17.32■□□□□ 0.36
PFDN2-201ENST00000368010 RBMY1CP0DJD4 496 aa17.32■□□□□ 0.36
PFDN2-201ENST00000368010 NANOS2P60321 138 aaKnown RBP17.32■□□□□ 0.36
PFDN2-201ENST00000368010 RBMY1FQ15415 496 aaKnown RBP17.32■□□□□ 0.36
PFDN2-201ENST00000368010 ZNF738Q8NE65 137 aa17.32■□□□□ 0.36
PFDN2-201ENST00000368010 PHLDA1Q8WV24 401 aaPredicted RBP17.32■□□□□ 0.36
PFDN2-201ENST00000368010 SLC35B3Q9H1N7 401 aa17.32■□□□□ 0.36
PFDN2-201ENST00000368010 KLK5Q9Y337 293 aaPredicted RBP17.32■□□□□ 0.36
PFDN2-201ENST00000368010 PXMP4Q9Y6I8 212 aa17.32■□□□□ 0.36
PFDN2-201ENST00000368010 DUSP14O95147 198 aaKnown RBP17.31■□□□□ 0.36
PFDN2-201ENST00000368010 CXCL2P19875 107 aa17.31■□□□□ 0.36
PFDN2-201ENST00000368010 CXCL3P19876 107 aa17.31■□□□□ 0.36
PFDN2-201ENST00000368010 MORN5Q5VZ52 161 aa17.31■□□□□ 0.36
PFDN2-201ENST00000368010 LCN15Q6UWW0 184 aa17.31■□□□□ 0.36
PFDN2-201ENST00000368010 RYR2Q92736 4967 aa17.31■□□□□ 0.36
PFDN2-201ENST00000368010 MPC2O95563 127 aa17.3■□□□□ 0.36
PFDN2-201ENST00000368010 CNN1P51911 297 aaKnown RBP17.3■□□□□ 0.36
PFDN2-201ENST00000368010 ZNF705AQ6ZN79 300 aaPredicted RBP17.3■□□□□ 0.36
PFDN2-201ENST00000368010 NPCDR1Q9BY65 106 aa17.3■□□□□ 0.36
PFDN2-201ENST00000368010 HRH4Q9H3N8 390 aa17.3■□□□□ 0.36
PFDN2-201ENST00000368010 A8MTW9 85 aa17.29■□□□□ 0.36
PFDN2-201ENST00000368010 CLINT1Q14677 625 aa17.29■□□□□ 0.36
PFDN2-201ENST00000368010 THAP6Q8TBB0 222 aa17.29■□□□□ 0.36
PFDN2-201ENST00000368010 SLC50A1Q9BRV3 221 aa17.29■□□□□ 0.36
PFDN2-201ENST00000368010 ALG5Q9Y673 324 aa17.29■□□□□ 0.36
PFDN2-201ENST00000368010 HLA-DMBP28068 263 aa17.28■□□□□ 0.36
PFDN2-201ENST00000368010 PSG3Q16557 428 aa17.28■□□□□ 0.36
PFDN2-201ENST00000368010 NEU1Q99519 415 aa17.28■□□□□ 0.36
PFDN2-201ENST00000368010 RNF126Q9BV68 326 aa17.28■□□□□ 0.36
PFDN2-201ENST00000368010 ZNF331Q9NQX6 463 aaPredicted RBP17.28■□□□□ 0.36
PFDN2-201ENST00000368010 IGHV3OR16-12A0A075B7B8 117 aa17.27■□□□□ 0.36
PFDN2-201ENST00000368010 ZNF705FA8MVS1 300 aaPredicted RBP17.27■□□□□ 0.36
PFDN2-201ENST00000368010 SNRPCP09234 159 aaKnown RBP17.27■□□□□ 0.36
PFDN2-201ENST00000368010 ZNF705DP0CH99 300 aaPredicted RBP17.27■□□□□ 0.36
PFDN2-201ENST00000368010 ZNF705BP0CI00 300 aaPredicted RBP17.27■□□□□ 0.36
PFDN2-201ENST00000368010 IGLC2P0DOY2 106 aa17.27■□□□□ 0.36
PFDN2-201ENST00000368010 AMTNQ6UX39 209 aa17.27■□□□□ 0.36
PFDN2-201ENST00000368010 GOLT1BQ9Y3E0 138 aa17.27■□□□□ 0.36
PFDN2-201ENST00000368010 TRAV5A0A0B4J249 113 aa17.26■□□□□ 0.35
PFDN2-201ENST00000368010 AMBPP02760 352 aa17.26■□□□□ 0.35
PFDN2-201ENST00000368010 OR11H7Q8NGC8 314 aa17.26■□□□□ 0.35
PFDN2-201ENST00000368010 OR8A1Q8NGG7 326 aa17.26■□□□□ 0.35
PFDN2-201ENST00000368010 KCNIP2Q9NS61 270 aa17.26■□□□□ 0.35
PFDN2-201ENST00000368010 SMIM9A6NGZ8 99 aa17.25■□□□□ 0.35
PFDN2-201ENST00000368010 H3BTX0 84 aa17.25■□□□□ 0.35
PFDN2-201ENST00000368010 HIST1H1AQ02539 215 aaPredicted RBP17.25■□□□□ 0.35
PFDN2-201ENST00000368010 RPUSD4Q96CM3 377 aaKnown RBP17.25■□□□□ 0.35
PFDN2-201ENST00000368010 WDR61Q9GZS3 305 aaKnown RBP17.25■□□□□ 0.35
PFDN2-201ENST00000368010 H3BQ15 152 aa17.24■□□□□ 0.35
PFDN2-201ENST00000368010 GUK1Q16774 197 aa17.24■□□□□ 0.35
PFDN2-201ENST00000368010 IGF2BP2-AS1Q96M15 143 aa17.24■□□□□ 0.35
PFDN2-201ENST00000368010 ATP5SQ99766 215 aa17.24■□□□□ 0.35
PFDN2-201ENST00000368010 MBD2Q9UBB5 411 aa17.24■□□□□ 0.35
PFDN2-201ENST00000368010 HSPB11Q9Y547 144 aa17.24■□□□□ 0.35
PFDN2-201ENST00000368010 SLC17A3O00476 420 aa17.23■□□□□ 0.35
PFDN2-201ENST00000368010 RPL12P30050 165 aaKnown RBP17.23■□□□□ 0.35
PFDN2-201ENST00000368010 RHOBP62745 196 aa17.23■□□□□ 0.35
PFDN2-201ENST00000368010 SPINK13Q1W4C9 94 aa17.23■□□□□ 0.35
PFDN2-201ENST00000368010 C1orf158Q8N1D5 194 aa17.23■□□□□ 0.35
PFDN2-201ENST00000368010 RFNGQ9Y644 331 aa17.23■□□□□ 0.35
PFDN2-201ENST00000368010 PLECQ15149 4684 aaKnown RBP17.22■□□□□ 0.35
PFDN2-201ENST00000368010 TMEM189A5PLL7 270 aa17.22■□□□□ 0.35
PFDN2-201ENST00000368010 C11orf94C9JXX5 98 aa17.22■□□□□ 0.35
PFDN2-201ENST00000368010 BOLA2-SMG1P6H3BVE0 249 aa17.22■□□□□ 0.35
PFDN2-201ENST00000368010 GCSAMLQ5JQS6 135 aa17.22■□□□□ 0.35
PFDN2-201ENST00000368010 LINC00476Q8WZB0 136 aa17.22■□□□□ 0.35
PFDN2-201ENST00000368010 PPP1R14DQ9NXH3 145 aa17.22■□□□□ 0.35
PFDN2-201ENST00000368010 LYSTQ99698 3801 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 C17orf112F2Z3M2 114 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 M0R2Z0 102 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 INSP01308 110 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 HBE1P02100 147 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 SAT2Q96F10 170 aaPredicted RBP17.21■□□□□ 0.35
PFDN2-201ENST00000368010 TMEM208Q9BTX3 173 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 MED28Q9H204 178 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 TMEM14CQ9P0S9 112 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 CELA1Q9UNI1 258 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 ALMS1Q8TCU4 4167 aa17.21■□□□□ 0.35
PFDN2-201ENST00000368010 Q6ZTC4 211 aa17.2■□□□□ 0.34
PFDN2-201ENST00000368010 C2CD4CQ8TF44 421 aa17.2■□□□□ 0.34
PFDN2-201ENST00000368010 SMIM3Q9BZL3 60 aa17.2■□□□□ 0.34
PFDN2-201ENST00000368010 ZNF586Q9NXT0 402 aa17.2■□□□□ 0.34
PFDN2-201ENST00000368010 DNAH1Q9P2D7 4330 aa17.19■□□□□ 0.34
PFDN2-201ENST00000368010 ZNF253O75346 499 aa17.19■□□□□ 0.34
PFDN2-201ENST00000368010 PRB4P10163 310 aaPredicted RBP17.19■□□□□ 0.34
PFDN2-201ENST00000368010 EMP1P54849 157 aa17.19■□□□□ 0.34
PFDN2-201ENST00000368010 CRXO43186 299 aaPredicted RBP17.18■□□□□ 0.34
PFDN2-201ENST00000368010 IFNA5P01569 189 aa17.18■□□□□ 0.34
PFDN2-201ENST00000368010 HIST1H1EP10412 219 aaKnown RBP17.18■□□□□ 0.34
PFDN2-201ENST00000368010 FCN2Q15485 313 aa17.18■□□□□ 0.34
PFDN2-201ENST00000368010 RRN3P1Q2M238 152 aa17.18■□□□□ 0.34
PFDN2-201ENST00000368010 BAP18Q8IXM2 172 aa17.18■□□□□ 0.34
PFDN2-201ENST00000368010 SCGB1C1Q8TD33 95 aa17.18■□□□□ 0.34
PFDN2-201ENST00000368010 TRBV19A0A075B6N1 114 aa17.17■□□□□ 0.34
PFDN2-201ENST00000368010 TRAV10A0A0B4J240 114 aa17.17■□□□□ 0.34
PFDN2-201ENST00000368010 LY6G6CO95867 125 aa17.17■□□□□ 0.34
PFDN2-201ENST00000368010 SPART-AS1P0CW21 52 aa17.17■□□□□ 0.34
PFDN2-201ENST00000368010 OR10J6PQ8NGY7 276 aa17.17■□□□□ 0.34
PFDN2-201ENST00000368010 MRPL32Q9BYC8 188 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms