RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 IGHV1-46P01743 117 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 SAA4P35542 130 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 ZNF319Q9P2F9 582 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 XIRP1Q702N8 1843 aaKnown RBP7.98□□□□□ -1.13
CHD3-202ENST00000358181 YLPM1P49750 1951 aaKnown RBP7.98□□□□□ -1.13
CHD3-202ENST00000358181 IGHV1-3A0A0C4DH29 117 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 COL8A2P25067 703 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 LY6G5BQ8NDX9 201 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 PLPPR1Q8TBJ4 325 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 NCR3O14931 201 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 IGHV4-59P01825 116 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 C1QTNF9P0C862 333 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 ZNF138P52744 262 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 PLSCR4Q9NRQ2 329 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 CFHR4Q92496 578 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 VWCEQ96DN2 955 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 SMDT1Q9H4I9 107 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 DEFB4AO15263 64 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 PSG3Q16557 428 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 BCL6BQ8N143 479 aaPredicted RBP7.97□□□□□ -1.13
CHD3-202ENST00000358181 PI4KAP42356 2102 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 A0A1B0GUS0 222 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 TBX6O95947 436 aaPredicted RBP7.97□□□□□ -1.13
CHD3-202ENST00000358181 SRSF3P84103 164 aaKnown RBP7.97□□□□□ -1.13
CHD3-202ENST00000358181 UBE2D4Q9Y2X8 147 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 DOCK6Q96HP0 2047 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 A0A096LNI7 61 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 IGHG2P01859 326 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 GLRX5Q86SX6 157 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 NPBQ8NG41 125 aa7.97□□□□□ -1.13
CHD3-202ENST00000358181 hDV102S1A0JD36 115 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 FAM223BA6NKX1 122 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 MORN2Q502X0 79 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 FAM223AQ8IWN6 122 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 A0A087WV48 116 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 A0A0G2JNJ9 132 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 NMBP08949 121 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 TIMP3P35625 211 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 Q9UFV3 132 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 POLEQ07864 2286 aa7.96□□□□□ -1.13
CHD3-202ENST00000358181 SHISA9B4DS77 424 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 PROP1O75360 226 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 MSMBP08118 114 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 UBE2D1P51668 147 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 CHCHD2Q9Y6H1 151 aaPredicted RBP7.96□□□□□ -1.14
CHD3-202ENST00000358181 DLEU1O43261 78 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 COX5BP10606 129 aa7.96□□□□□ -1.14
CHD3-202ENST00000358181 TRAV26-2A0A0B4J265 109 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 TRPT1Q86TN4 253 aaKnown RBP7.95□□□□□ -1.14
CHD3-202ENST00000358181 CACNA1DQ01668 2161 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 NYNRINQ9P2P1 1898 aaKnown RBP7.95□□□□□ -1.14
CHD3-202ENST00000358181 COL4A6Q14031 1691 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 A0A087X0K7 114 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 PINLYPA6NC86 204 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 ZNF660Q6AZW8 331 aaPredicted RBP7.95□□□□□ -1.14
CHD3-202ENST00000358181 DUX4L9Q6RFH8 374 aaPredicted RBP7.95□□□□□ -1.14
CHD3-202ENST00000358181 LIME1Q9H400 295 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 TP53TG1Q9Y2A0 90 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 CAMK2N2Q96S95 79 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 IGHMP01871 453 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 CFHR2P36980 270 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 PRR4Q16378 134 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 ATRAIDQ6UW56 229 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 PIFOQ8TCI5 191 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 MPDZO75970 2070 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 PIN1P1O15428 100 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 HLA-DRB4P13762 266 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 SLX1AQ9BQ83 275 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 HLA-DRB4X5D2U9 266 aa7.95□□□□□ -1.14
CHD3-202ENST00000358181 SMIM10L1P0DMW3 83 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 PRR30Q53SZ7 412 aaPredicted RBP7.94□□□□□ -1.14
CHD3-202ENST00000358181 SMIM10Q96HG1 83 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 A0A0J9YWU9 116 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 SPATA31B1PQ5VZV4 182 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 SDK2Q58EX2 2172 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 GUSBP1Q15486 140 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 DAZ1Q9NQZ3 744 aaKnown RBP7.94□□□□□ -1.14
CHD3-202ENST00000358181 KIF26BQ2KJY2 2108 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 LRRC37AA6NMS7 1700 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 LYPD6BQ8NI32 183 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 USMG5Q96IX5 58 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 MYLKQ15746 1914 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 DANCRP0C864 163 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 IGHV1-8P0DP01 117 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 H2BFSP57053 126 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 DEFB136Q30KP8 78 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 ZNF708P17019 499 aa7.94□□□□□ -1.14
CHD3-202ENST00000358181 FANCMQ8IYD8 2048 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 AMBPP02760 352 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 HEATR1Q9H583 2144 aaKnown RBP7.93□□□□□ -1.14
CHD3-202ENST00000358181 ALPK2Q86TB3 2170 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 HRCT1Q6UXD1 115 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 LAMTOR2Q9Y2Q5 125 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 GREB1LQ9C091 1923 aaPredicted RBP7.93□□□□□ -1.14
CHD3-202ENST00000358181 DOCK8Q8NF50 2099 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 GAGE12HA6NDE8 117 aa7.93□□□□□ -1.14
CHD3-202ENST00000358181 KMT2EQ8IZD2 1858 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms