RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CRIP1P50238 77 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 C20orf78Q9BR46 151 aa12.19□□□□□ -0.46
LMNA-201ENST00000347559 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
LMNA-201ENST00000347559 GAGE13Q4V321 117 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 C8orf46Q8TAG6 207 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
LMNA-201ENST00000347559 PSG8Q9UQ74 426 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 ZFHX4Q86UP3 3567 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 IGHV1-18A0A0C4DH31 117 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 A0A1B0GWB2 263 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 M0R3E3 92 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 CT45A10P0DMU9 189 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 CCL3L1P16619 93 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
LMNA-201ENST00000347559 CEND1Q8N111 149 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 C16orf97H3BN30 126 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 KIR2DL2P43627 348 aaPredicted RBP12.17□□□□□ -0.46
LMNA-201ENST00000347559 OR10X1Q8NGY0 326 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 TMEM167AQ8TBQ9 72 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 CFAP47Q6ZTR5 3102 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 E9PLD3 99 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 RBP4P02753 201 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 ZC2HC1BQ5TFG8 222 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 MBNL2Q5VZF2 373 aaKnown RBP12.17□□□□□ -0.46
LMNA-201ENST00000347559 FAM169BQ8N8A8 192 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 OR4C13Q8NGP0 309 aa12.17□□□□□ -0.46
LMNA-201ENST00000347559 A0A1B0GW15 77 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 WI2-2373I1.2A0A1W2PRP0 233 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 TWIST1Q15672 202 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 RITA1Q96K30 269 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 TRGV9Q99603 122 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 FOXC2Q99958 501 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 MC5RP33032 325 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 LEPP41159 167 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 SLC25A39Q9BZJ4 359 aaPredicted RBP12.16□□□□□ -0.46
LMNA-201ENST00000347559 TMEM160Q9NX00 188 aa12.16□□□□□ -0.46
LMNA-201ENST00000347559 WDFY4Q6ZS81 3184 aa12.15□□□□□ -0.46
LMNA-201ENST00000347559 ZNF562Q6V9R5 426 aa12.15□□□□□ -0.46
LMNA-201ENST00000347559 GAFA1Q96PS6 74 aa12.15□□□□□ -0.46
LMNA-201ENST00000347559 SFTA2Q6UW10 78 aa12.15□□□□□ -0.47
LMNA-201ENST00000347559 ZNF833PQ6ZTB9 187 aa12.15□□□□□ -0.47
LMNA-201ENST00000347559 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.47
LMNA-201ENST00000347559 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.47
LMNA-201ENST00000347559 IGKCP01834 107 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 EVI2AP22794 236 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 TMEM133Q9H2Q1 129 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 RNF7Q9UBF6 113 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 M0R1B8 84 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 PRRG2O14669 202 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 APOMO95445 188 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 ODF1Q14990 250 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 TCTEX1D4Q5JR98 221 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 ZNF493Q6ZR52 646 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 SYT8Q8NBV8 401 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
LMNA-201ENST00000347559 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 HIGD1BQ9P298 99 aa12.14□□□□□ -0.47
LMNA-201ENST00000347559 NPIPB5A8MRT5 1133 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 LHBP01229 141 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 Q6AWC8 147 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 SPINK8P0C7L1 97 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 ATP1A1-AS1Q5TC04 95 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 ASPMQ8IZT6 3477 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
LMNA-201ENST00000347559 MRPL16Q9NX20 251 aaKnown RBP12.13□□□□□ -0.47
LMNA-201ENST00000347559 TRAV40A0A0B4J280 105 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 TMEM8BA6NDV4 472 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 FER1L6-AS2Q96M78 137 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 U3KQK5 164 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 PAX8Q06710 450 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 MDS2Q8NDY4 140 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
LMNA-201ENST00000347559 ZNF576Q9H609 170 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
LMNA-201ENST00000347559 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 C9orf106Q8NAJ2 232 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 NGBQ9NPG2 151 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 CRYGCP07315 174 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 TNFAIP6P98066 277 aaPredicted RBP12.11□□□□□ -0.47
LMNA-201ENST00000347559 PMS2CLQ68D20 193 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 TMEM75Q8N9X5 138 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 MAP1LC3AQ9H492 121 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 TRBV19A0A075B6N1 114 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 SH2D1AO60880 128 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
LMNA-201ENST00000347559 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
LMNA-201ENST00000347559 C8orf86Q6ZUL3 223 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
LMNA-201ENST00000347559 DPM2O94777 84 aa12.1□□□□□ -0.47
LMNA-201ENST00000347559 MT-ATP8P03928 68 aa12.1□□□□□ -0.47
LMNA-201ENST00000347559 GATA3P23771 443 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms