RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MRPS12O15235 138 aaKnown RBP14.01□□□□□ -0.17
SYNE4-202ENST00000340477 DEFB1P60022 68 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 PSG9Q00887 426 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 CASC10Q5T4H9 136 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 MORN5Q5VZ52 161 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 INO80EQ8NBZ0 244 aaPredicted RBP14.01□□□□□ -0.17
SYNE4-202ENST00000340477 C17orf77Q96MU5 243 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 HRH4Q9H3N8 390 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 XCL2Q9UBD3 114 aa14.01□□□□□ -0.17
SYNE4-202ENST00000340477 GIG44P09565 113 aaPredicted RBP14□□□□□ -0.17
SYNE4-202ENST00000340477 ZNF266Q14584 549 aa14□□□□□ -0.17
SYNE4-202ENST00000340477 PSG3Q16557 428 aa14□□□□□ -0.17
SYNE4-202ENST00000340477 IGFL4Q6B9Z1 124 aa14□□□□□ -0.17
SYNE4-202ENST00000340477 MRPL32Q9BYC8 188 aaKnown RBP14□□□□□ -0.17
SYNE4-202ENST00000340477 PARD6GQ9BYG4 376 aaPredicted RBP14□□□□□ -0.17
SYNE4-202ENST00000340477 C11orf68Q9H3H3 251 aaKnown RBP14□□□□□ -0.17
SYNE4-202ENST00000340477 TRAV5A0A0B4J249 113 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 IGLC2P0DOY2 106 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 FFAR4Q5NUL3 377 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 AQP10Q96PS8 301 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 MFFQ9GZY8 342 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 ZNF331Q9NQX6 463 aaPredicted RBP13.99□□□□□ -0.17
SYNE4-202ENST00000340477 PPP1R14DQ9NXH3 145 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 TMEM14CQ9P0S9 112 aa13.99□□□□□ -0.17
SYNE4-202ENST00000340477 FXYD6-FXYD2A0A087WZ82 144 aa13.98□□□□□ -0.17
SYNE4-202ENST00000340477 SNRPCP09234 159 aaKnown RBP13.98□□□□□ -0.17
SYNE4-202ENST00000340477 MIFP14174 115 aa13.98□□□□□ -0.17
SYNE4-202ENST00000340477 HIST1H1AQ02539 215 aaPredicted RBP13.98□□□□□ -0.17
SYNE4-202ENST00000340477 GCSAMLQ5JQS6 135 aa13.98□□□□□ -0.17
SYNE4-202ENST00000340477 OR2T35Q8NGX2 323 aa13.98□□□□□ -0.17
SYNE4-202ENST00000340477 RPUSD4Q96CM3 377 aaKnown RBP13.98□□□□□ -0.17
SYNE4-202ENST00000340477 H3BTX0 84 aa13.97□□□□□ -0.17
SYNE4-202ENST00000340477 AMBPP02760 352 aa13.97□□□□□ -0.17
SYNE4-202ENST00000340477 CNN1P51911 297 aaKnown RBP13.97□□□□□ -0.17
SYNE4-202ENST00000340477 FXYD7P58549 80 aa13.97□□□□□ -0.17
SYNE4-202ENST00000340477 TIMM9Q9Y5J7 89 aa13.97□□□□□ -0.17
SYNE4-202ENST00000340477 CXorf65A6NEN9 183 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 ZNF705EA8MWA4 302 aaPredicted RBP13.96□□□□□ -0.17
SYNE4-202ENST00000340477 ZNF253O75346 499 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 HIST1H1EP10412 219 aaKnown RBP13.96□□□□□ -0.17
SYNE4-202ENST00000340477 RHOBP62745 196 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 OR8A1Q8NGG7 326 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 SLC35B3Q9H1N7 401 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 FUT9Q9Y231 359 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 GOLT1BQ9Y3E0 138 aa13.96□□□□□ -0.17
SYNE4-202ENST00000340477 H3BQ15 152 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 SLC17A3O00476 420 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 HLA-DMBP28068 263 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 TAS2R45P59539 299 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 PDE6HQ13956 83 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 ACOT6Q3I5F7 207 aaPredicted RBP13.95□□□□□ -0.18
SYNE4-202ENST00000340477 MIR17HGQ75NE6 70 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 CSNK1G2-AS1Q8NCQ2 148 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 OR10J6PQ8NGY7 276 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 SLC25A2Q9BXI2 301 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 AAMDCQ9H7C9 122 aa13.95□□□□□ -0.18
SYNE4-202ENST00000340477 TRBV19A0A075B6N1 114 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 A8MTW9 85 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 OR7C2O60412 319 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 PMS2P11Q13670 270 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 BLNKQ8WV28 456 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 WFDC1Q9HC57 220 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 ZNF586Q9NXT0 402 aa13.94□□□□□ -0.18
SYNE4-202ENST00000340477 IGHV3OR16-12A0A075B7B8 117 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 IGHV4-28A0A0C4DH34 117 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 BOLA2-SMG1P6H3BVE0 249 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 INSP01308 110 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 ZNF705DP0CH99 300 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-202ENST00000340477 ZNF705BP0CI00 300 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-202ENST00000340477 PYYP10082 97 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 KHDC3LQ587J8 217 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 Q8NAQ8 132 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 C11orf45Q8TAV5 145 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 SAT2Q96F10 170 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-202ENST00000340477 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 PAXXQ9BUH6 204 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 OR51M1Q9H341 326 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 PRELID1Q9Y255 219 aa13.93□□□□□ -0.18
SYNE4-202ENST00000340477 BORCS7-ASMTA0A0B4J1R7 106 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 NUPR2A6NF83 97 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 DEFB4AO15263 64 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 SPINK13Q1W4C9 94 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 Q5BKY6 102 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 HSD17B11Q8NBQ5 300 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 MRPL53Q96EL3 112 aaKnown RBP13.92□□□□□ -0.18
SYNE4-202ENST00000340477 IGF2BP2-AS1Q96M15 143 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 TNFSF18Q9UNG2 199 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 X6R8D5 127 aa13.92□□□□□ -0.18
SYNE4-202ENST00000340477 A0A1W2PPV4 95 aa13.91□□□□□ -0.18
SYNE4-202ENST00000340477 SMIM9A6NGZ8 99 aa13.91□□□□□ -0.18
SYNE4-202ENST00000340477 M6PRP20645 277 aa13.91□□□□□ -0.18
SYNE4-202ENST00000340477 AMTNQ6UX39 209 aa13.91□□□□□ -0.18
SYNE4-202ENST00000340477 ZNF705AQ6ZN79 300 aaPredicted RBP13.91□□□□□ -0.18
SYNE4-202ENST00000340477 FAM167A-AS1Q96KT0 104 aa13.91□□□□□ -0.18
SYNE4-202ENST00000340477 NEU1Q99519 415 aa13.91□□□□□ -0.18
SYNE4-202ENST00000340477 ZNF705FA8MVS1 300 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-202ENST00000340477 M0R2Z0 102 aa13.9□□□□□ -0.18
SYNE4-202ENST00000340477 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
SYNE4-202ENST00000340477 TSPOP30536 169 aa13.9□□□□□ -0.18
SYNE4-202ENST00000340477 UBE2L3P68036 154 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms