RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TCTEX1D4Q5JR98 221 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 TNFRSF14Q92956 283 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 RBBP6Q7Z6E9 1792 aaKnown RBP9.62□□□□□ -0.87
SHANK2-201ENST00000338508 A0A0A6YYD4 124 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 AMN1Q8IY45 258 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 ZNRD1Q9P1U0 126 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 A0A087WWC5 75 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 LIME1Q9H400 295 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 MYLKQ15746 1914 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 PARP14Q460N5 1801 aa9.62□□□□□ -0.87
SHANK2-201ENST00000338508 A0A1B0GTI1 187 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 SEC11AP67812 179 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 PSG3Q16557 428 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 IGKV1OR2-108A0A075B7D4 117 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 USF3Q68DE3 2245 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 GREM1O60565 184 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 MLANAQ16655 118 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 THSD7AQ9UPZ6 1657 aa9.61□□□□□ -0.87
SHANK2-201ENST00000338508 TRBV25-1A0A075B6N4 114 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 RNF222A6NCQ9 220 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
SHANK2-201ENST00000338508 IGKV1D-8A0A087WSZ0 117 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 CD177Q8N6Q3 437 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
SHANK2-201ENST00000338508 A0A0J9YY99 117 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 IGKV1-9A0A0C4DH69 117 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 A0A1B0GWJ7 208 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 CFHR2P36980 270 aa9.6□□□□□ -0.87
SHANK2-201ENST00000338508 NYNRINQ9P2P1 1898 aaKnown RBP9.59□□□□□ -0.87
SHANK2-201ENST00000338508 SCN4AP35499 1836 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 PRSS29PA6NIE9 313 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HGFACQ04756 655 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 MRPL14Q6P1L8 145 aaKnown RBP9.59□□□□□ -0.87
SHANK2-201ENST00000338508 C8orf49Q96NF6 230 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 BRWD3Q6RI45 1802 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 E9PQ18 207 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BKO60814 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 IGKV1-39P01597 117 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 IGKV1D-39P04432 117 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BJP06899 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BOP23527 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BBP33778 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BDP58876 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BCP62807 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST2H2BEQ16778 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BHQ93079 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 DSCR8Q96T75 97 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BNQ99877 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 HIST1H2BMQ99879 126 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 VWC2Q2TAL6 325 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 SLC25A48Q6ZT89 311 aaKnown RBP9.59□□□□□ -0.87
SHANK2-201ENST00000338508 CARHSP1Q9Y2V2 147 aaKnown RBP9.59□□□□□ -0.87
SHANK2-201ENST00000338508 MRPS18CQ9Y3D5 142 aaKnown RBP9.59□□□□□ -0.87
SHANK2-201ENST00000338508 ROS1P08922 2347 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 MINOS1Q5TGZ0 78 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 TMEM256Q8N2U0 113 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 USMG5Q96IX5 58 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 MINOS1-NBL1R4GNA1 71 aa9.59□□□□□ -0.87
SHANK2-201ENST00000338508 SOCS3O14543 225 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 EIF4EBP2Q13542 120 aaPredicted RBP9.58□□□□□ -0.88
SHANK2-201ENST00000338508 LY6G5BQ8NDX9 201 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
SHANK2-201ENST00000338508 LINC00271P0C7V0 271 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 NABP1Q96AH0 204 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 OVOL2Q9BRP0 275 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 SMIM2Q9BVW6 85 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 LINC01619G3V211 115 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 H0YJW9 148 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 PRR30Q53SZ7 412 aaPredicted RBP9.58□□□□□ -0.88
SHANK2-201ENST00000338508 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 STPG4Q8N801 248 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 CXCL1P09341 107 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 ARMS2P0C7Q2 107 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 CD59P13987 128 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 ACACAQ13085 2346 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 TRPM7Q96QT4 1865 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 PLXND1Q9Y4D7 1925 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 KIR3DS1Q14943 382 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 C9orf139Q6ZV77 190 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 TIMM17AQ99595 171 aa9.58□□□□□ -0.88
SHANK2-201ENST00000338508 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 C9orf153Q5TBE3 101 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 ATRXP46100 2492 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
SHANK2-201ENST00000338508 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 TP53TG1Q9Y2A0 90 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
SHANK2-201ENST00000338508 SUPT4H1P63272 117 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms