RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 H3BUX3 64 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 CD33P20138 364 aa13.81□□□□□ -0.2
TRAPPC11-201ENST00000334690 SPG11Q96JI7 2443 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 LY6HO94772 140 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 DKK1O94907 266 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 YPEL3P61236 119 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNF124Q15973 351 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 TEX36Q5VZQ5 186 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 HAPLN4Q86UW8 402 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 LYPD6Q86Y78 171 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 STHQ8IWL8 128 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 POU2AF1Q16633 256 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 SSC4DQ8WTU2 575 aa13.8□□□□□ -0.2
TRAPPC11-201ENST00000334690 ZNF815PA8K554 130 aa13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 SCGB1A1P11684 91 aa13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 PTPRQQ9UMZ3 2332 aa13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 Q6ZSR3 168 aa13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 LOXP28300 417 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 LYPD6BQ8NI32 183 aa13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 FNDC4Q9H6D8 234 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 MED13Q9UHV7 2174 aa13.79□□□□□ -0.2
TRAPPC11-201ENST00000334690 PRB4P10163 310 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 DPH3P1Q9H4G8 78 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 PLNP26678 52 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 K7ENP7 123 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 NDUFB8O95169 186 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 IGHV2-5P01817 119 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 CNTFRP26992 372 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 SAA4P35542 130 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
TRAPPC11-201ENST00000334690 SRD5A1P18405 259 aa13.77□□□□□ -0.2
TRAPPC11-201ENST00000334690 FAM231DQ6ZW35 169 aa13.77□□□□□ -0.2
TRAPPC11-201ENST00000334690 RNF182Q8N6D2 247 aa13.77□□□□□ -0.2
TRAPPC11-201ENST00000334690 C11orf52Q96A22 123 aa13.77□□□□□ -0.2
TRAPPC11-201ENST00000334690 DLEU1O43261 78 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 BRD3OSQ6XYD6 125 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 C20orf144Q9BQM9 153 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 TOMM7Q9P0U1 55 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 GUSBP1Q15486 140 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 CYYR1Q96J86 154 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 ZNF479Q96JC4 524 aa13.77□□□□□ -0.21
TRAPPC11-201ENST00000334690 GGTLC3B5MD39 225 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 AMN1Q8IY45 258 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 BPESC1Q9GZL8 116 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 C18orf32Q8TCD1 76 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 MUC6Q6W4X9 2439 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 A0A1B0GV72 72 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 hDV102S1A0JD36 115 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 HOXA3O43365 443 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 ZNF134P52741 427 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 WT1-ASQ06250 92 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 PLXNB3Q9ULL4 1909 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 NDUFS6O75380 124 aaKnown RBP13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 CD28P10747 220 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 TMEM249Q2WGJ8 235 aa13.76□□□□□ -0.21
TRAPPC11-201ENST00000334690 NDPQ00604 133 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 CD300EQ496F6 205 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 DMRTC2Q8IXT2 367 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 A8MWP6 167 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 ARMS2P0C7Q2 107 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 FAM215AQ9Y5M1 114 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 A0A1W2PRX2 142 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 UBE2E1P51965 193 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 TMEM75Q8N9X5 138 aa13.75□□□□□ -0.21
TRAPPC11-201ENST00000334690 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 EMP1P54849 157 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR31Q5SQ13 230 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 DUX4L9Q6RFH8 374 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 TRBV19A0A075B6N1 114 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 YAE1D1Q9NRH1 226 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 ANKHD1Q8IWZ3 2542 aaKnown RBP13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 VCYO14598 125 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 GTSCR1Q86UQ5 136 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 A6NNC1 897 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 FAM110DQ8TAY7 271 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 MEGF9Q9H1U4 602 aa13.74□□□□□ -0.21
TRAPPC11-201ENST00000334690 KIAA1671Q9BY89 1806 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 BCL6BQ8N143 479 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 KAAG1Q9UBP8 84 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 V9GYV3 84 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 GNLYP22749 145 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 IGFL4Q6B9Z1 124 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 MMP23AO75900 390 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR20EP86478 221 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR20CP86479 221 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR20DP86480 221 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR20BP86481 221 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR20AP86496 221 aa13.73□□□□□ -0.21
TRAPPC11-201ENST00000334690 CMC4P56277 68 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC11-201ENST00000334690 ZC2HC1BQ5TFG8 222 aa13.72□□□□□ -0.21
TRAPPC11-201ENST00000334690 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms