RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RAB13P51153 203 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 DLX6P56179 175 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 NUTF2P61970 127 aaKnown RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 RBX1P62877 108 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 RUNX1Q01196 453 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 RAB31Q13636 194 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 PSG5Q15238 335 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 C5orf47Q569G3 176 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 PDPNQ86YL7 162 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 ZFP82Q8N141 532 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR4C13Q8NGP0 309 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR4A5Q8NH83 315 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 LINC01006Q8NI28 216 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 RSG1Q9BU20 258 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 NKX6-2Q9C056 277 aaPredicted RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 COMMD5Q9GZQ3 224 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 SLC35B3Q9H1N7 401 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM133Q9H2Q1 129 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 NPVFQ9HCQ7 196 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 SLC39A9Q9NUM3 307 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 BET1LQ9NYM9 111 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CARHSP1Q9Y2V2 147 aaKnown RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR51B2Q9Y5P1 312 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 APC2O95996 2303 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 DMXL1Q9Y485 3027 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 PRR14LQ5THK1 2151 aa2.78□□□□□ -1.97
SMCO3-201ENST00000316048 ACACAQ13085 2346 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 DSCAMO60469 2012 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 CELSR3Q9NYQ7 3312 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 TRAV3A0A0B4J244 114 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 UBE2L5PA0A1B0GUS4 154 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 SOD3P08294 240 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 FGF7P21781 194 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 USF1P22415 310 aaPredicted RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 LGALS7P47929 136 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ZNF137PP52743 207 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ERHP84090 104 aaKnown RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ACOT6Q3I5F7 207 aaPredicted RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 SPINK9Q5DT21 86 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 AVPI1Q5T686 147 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 OR9G4Q8NGQ1 327 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ITLN2Q8WWU7 325 aaPredicted RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 MBD3L1Q8WWY6 194 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ACTR3CQ9C0K3 210 aaPredicted RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 KCNIP2Q9NS61 270 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 RPRMQ9NS64 109 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM14BQ9NUH8 114 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 WASHC3Q9Y3C0 194 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 AMMECR1Q9Y4X0 333 aaPredicted RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 INSIG2Q9Y5U4 225 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ZFHX4Q86UP3 3567 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 IGHV2-26A0A0B4J1V2 119 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 TEX50A0A1B0GTY4 177 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 A0A1B0GV50 99 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 H0YJW9 148 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ENSAO43768 121 aaKnown RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 FCN3O75636 299 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 IFNA1P01562 189 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 IGKV1-16P04430 117 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ARG1P05089 322 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 NPY1RP25929 384 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 TAS2R60P59551 318 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 ARF6P62330 175 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 PRCDQ00LT1 54 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 FLI1Q01543 452 aaPredicted RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 TNXAQ16473 311 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 VMA21Q3ZAQ7 101 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 KHDC3LQ587J8 217 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 OR10G4Q8NGN3 311 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 OR10G9Q8NGN4 311 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 OR1L8Q8NGR8 309 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 NABP2Q9BQ15 211 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 NPCDR1Q9BY65 106 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 MRPL20Q9BYC9 149 aaKnown RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 PATZ1Q9HBE1 687 aaKnown RBP2.77□□□□□ -1.97
SMCO3-201ENST00000316048 RFNGQ9Y644 331 aa2.77□□□□□ -1.97
SMCO3-201ENST00000316048 PTPRQQ9UMZ3 2332 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CUL9Q8IWT3 2517 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 TANC2Q9HCD6 1990 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CACNA1DQ01668 2161 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CADP27708 2225 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CTXND1A0A1B0GTU2 59 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 MAP1LC3B2A6NCE7 125 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 FNDC10F2Z333 226 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 BUB1B-PAK6H3BSN5 160 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 K7EMT4 169 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 M0R1W7 72 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CA2P00918 260 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 IGLV1-47P01700 117 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 SAA1P0DJI8 122 aaPredicted RBP2.76□□□□□ -1.97
SMCO3-201ENST00000316048 ADCYAP1P18509 176 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 MDKP21741 143 aaPredicted RBP2.76□□□□□ -1.97
SMCO3-201ENST00000316048 OPRK1P41145 380 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 REG1BP48304 166 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 EFNA4P52798 201 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CCL20P78556 96 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 ZNF726P1Q15940 193 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms