RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 NOTCH3Q9UM47 2321 aa16.93■□□□□ 0.3
CCDC85B-201ENST00000312579 OR10J4P0C629 311 aa16.93■□□□□ 0.3
CCDC85B-201ENST00000312579 ADCYAP1P18509 176 aa16.93■□□□□ 0.3
CCDC85B-201ENST00000312579 C16orf54Q6UWD8 224 aa16.93■□□□□ 0.3
CCDC85B-201ENST00000312579 DYNLRB2Q8TF09 96 aa16.93■□□□□ 0.3
CCDC85B-201ENST00000312579 PYYP10082 97 aa16.92■□□□□ 0.3
CCDC85B-201ENST00000312579 S100A7P31151 101 aa16.92■□□□□ 0.3
CCDC85B-201ENST00000312579 DEFB114Q30KQ6 69 aa16.92■□□□□ 0.3
CCDC85B-201ENST00000312579 CST9LP1Q5W188 147 aa16.92■□□□□ 0.3
CCDC85B-201ENST00000312579 SEC11CQ9BY50 192 aa16.92■□□□□ 0.3
CCDC85B-201ENST00000312579 IGKV3-7A0A075B6H7 116 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 A0A1W2PS18 150 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 C11orf94C9JXX5 98 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 CEBPGP53567 150 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 GLMPQ8WWB7 406 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 SIGLEC8Q9NYZ4 499 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 ARL2-SNX15V9GYD0 113 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 IZUMO1RA6ND01 250 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 APOC3P02656 99 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 SNRPCP09234 159 aaKnown RBP16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 CD81P60033 236 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 CD300EQ496F6 205 aaPredicted RBP16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 PRR31Q5SQ13 230 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 TCF24Q7RTU0 167 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 OR8I2Q8N0Y5 310 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 SUN5Q8TC36 379 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 TXNDC17Q9BRA2 123 aa16.91■□□□□ 0.3
CCDC85B-201ENST00000312579 FAM74A7A6NL05 159 aa16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 ATP5G3P48201 142 aa16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 OXLD1Q5BKU9 147 aa16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 C10orf91Q5T1B1 145 aa16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 CYB561D1Q8N8Q1 229 aa16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 CARHSP1Q9Y2V2 147 aaKnown RBP16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 YTHDF2Q9Y5A9 579 aaKnown RBP16.9■□□□□ 0.3
CCDC85B-201ENST00000312579 GP9P14770 177 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 SOHLH1Q5JUK2 328 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 C9orf66Q5T8R8 295 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 FXYD5Q96DB9 178 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 GRAMD2BQ96HH9 432 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 TMEM14CQ9P0S9 112 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 RNF24Q9Y225 148 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 SMAD5-AS1Q9Y6J3 95 aa16.89■□□□□ 0.29
CCDC85B-201ENST00000312579 NDUFS6O75380 124 aaKnown RBP16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 IGLV1-51P01701 117 aa16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 RPL11P62913 178 aaKnown RBP16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 C1orf194Q5T5A4 169 aa16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 FAM90A2PQ658T7 463 aa16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 TMEM61Q8N0U2 210 aa16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 MCRIP2Q9BUT9 160 aaKnown RBP16.88■□□□□ 0.29
CCDC85B-201ENST00000312579 BMI1P35226 326 aa16.87■□□□□ 0.29
CCDC85B-201ENST00000312579 SIGLEC15Q6ZMC9 328 aa16.87■□□□□ 0.29
CCDC85B-201ENST00000312579 BPIFA4PQ86YQ2 179 aa16.87■□□□□ 0.29
CCDC85B-201ENST00000312579 GBGT1Q8N5D6 347 aa16.87■□□□□ 0.29
CCDC85B-201ENST00000312579 A0A1W2PRE2 83 aa16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 F6UZH7 168 aa16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 TMEM250H0YL14 139 aa16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 MRPS12O15235 138 aaKnown RBP16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 PDE6DO43924 150 aa16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 C17orf77Q96MU5 243 aa16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 H3BTX0 84 aa16.86■□□□□ 0.29
CCDC85B-201ENST00000312579 NBEAP1P0C6P0 100 aa16.85■□□□□ 0.29
CCDC85B-201ENST00000312579 TFPI2P48307 235 aa16.85■□□□□ 0.29
CCDC85B-201ENST00000312579 SVBPQ8N300 66 aa16.85■□□□□ 0.29
CCDC85B-201ENST00000312579 BLNKQ8WV28 456 aa16.85■□□□□ 0.29
CCDC85B-201ENST00000312579 G3V4G9 280 aa16.84■□□□□ 0.29
CCDC85B-201ENST00000312579 HIST1H1EP10412 219 aaKnown RBP16.84■□□□□ 0.29
CCDC85B-201ENST00000312579 RPL7P18124 248 aaKnown RBP16.84■□□□□ 0.29
CCDC85B-201ENST00000312579 GUCA2BQ16661 112 aa16.84■□□□□ 0.29
CCDC85B-201ENST00000312579 RBPMS2Q6ZRY4 209 aaKnown RBP16.84■□□□□ 0.29
CCDC85B-201ENST00000312579 WFDC3Q8IUB2 231 aa16.84■□□□□ 0.29
CCDC85B-201ENST00000312579 ZNF785A8K8V0 405 aa16.83■□□□□ 0.28
CCDC85B-201ENST00000312579 H3BQ15 152 aa16.83■□□□□ 0.28
CCDC85B-201ENST00000312579 GALR1P47211 349 aa16.83■□□□□ 0.28
CCDC85B-201ENST00000312579 INSL3P51460 131 aa16.83■□□□□ 0.28
CCDC85B-201ENST00000312579 NKX6-2Q9C056 277 aaPredicted RBP16.83■□□□□ 0.28
CCDC85B-201ENST00000312579 MS4A6AQ9H2W1 248 aa16.83■□□□□ 0.28
CCDC85B-201ENST00000312579 HELTA6NFD8 242 aa16.82■□□□□ 0.28
CCDC85B-201ENST00000312579 RPUSD4Q96CM3 377 aaKnown RBP16.82■□□□□ 0.28
CCDC85B-201ENST00000312579 GGTLC3B5MD39 225 aa16.81■□□□□ 0.28
CCDC85B-201ENST00000312579 IGLC2P0DOY2 106 aa16.81■□□□□ 0.28
CCDC85B-201ENST00000312579 ATF4P18848 351 aaPredicted RBP16.81■□□□□ 0.28
CCDC85B-201ENST00000312579 CCDC28AQ8IWP9 274 aa16.81■□□□□ 0.28
CCDC85B-201ENST00000312579 GPR82Q96P67 336 aa16.81■□□□□ 0.28
CCDC85B-201ENST00000312579 ZNF586Q9NXT0 402 aa16.81■□□□□ 0.28
CCDC85B-201ENST00000312579 SCO2A0A1W2PP80 73 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 TSPAN4O14817 238 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 SUMO1P63165 101 aaKnown RBP16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 ZNF674Q2M3X9 581 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 ZNF727A8MUV8 499 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 SNAPINO95295 136 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 RANP62826 216 aaKnown RBP16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 FAM24BQ8N5W8 94 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 SMIM7Q9BQ49 75 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 NIPSNAP3BQ9BS92 247 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 PARLQ9H300 379 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 NRN1Q9NPD7 142 aa16.8■□□□□ 0.28
CCDC85B-201ENST00000312579 TRAV25A0A0B4J276 109 aa16.79■□□□□ 0.28
CCDC85B-201ENST00000312579 DNASE2O00115 360 aaPredicted RBP16.79■□□□□ 0.28
CCDC85B-201ENST00000312579 SLC17A3O00476 420 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms