RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ESPL1Q14674 2120 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 SRRM4A7MD48 611 aaKnown RBP12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 C9JAW5 83 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 IGHV1-24A0A0C4DH33 117 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 A0A1W2PPI3 338 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 OVOL1O14753 267 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 MALP21145 153 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 ZNF876PQ49A33 203 aa12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 PTPRZ1P23471 2315 aaPredicted RBP12.41□□□□□ -0.42
SHROOM4-201ENST00000289292 FCN3O75636 299 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 C3orf36Q3SXR2 165 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 BRD3OSQ6XYD6 125 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 MDS2Q8NDY4 140 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 TRAV26-2A0A0B4J265 109 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 A0A0G2JNJ9 132 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 Q9UFV3 132 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 DOCK11Q5JSL3 2073 aa12.4□□□□□ -0.42
SHROOM4-201ENST00000289292 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 COL8A2P25067 703 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 TNFRSF14Q92956 283 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 LINC00158P58513 81 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 YLPM1P49750 1951 aaKnown RBP12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 GAGE1Q13065 139 aa12.39□□□□□ -0.43
SHROOM4-201ENST00000289292 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 TICRRQ7Z2Z1 1910 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 ASXL3Q9C0F0 2248 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 ADARB2-AS1A8MUL3 147 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 DPH3P1Q9H4G8 78 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 PEMTQ9UBM1 199 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 K7EP13 123 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 TMEM14BQ9NUH8 114 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 K7EN84 100 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 K7ERJ3 54 aa12.38□□□□□ -0.43
SHROOM4-201ENST00000289292 TRGV11A0A075B6L2 103 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 TPRP12270 2363 aaKnown RBP12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 RTTNQ86VV8 2226 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 PROK2Q9HC23 129 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 PHLDA1Q8WV24 401 aaPredicted RBP12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 SPXQ9BT56 116 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 GFRA4Q9GZZ7 299 aa12.37□□□□□ -0.43
SHROOM4-201ENST00000289292 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 VWC2Q2TAL6 325 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 VOPP1Q96AW1 172 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 SHANK2-AS3Q9BTD1 123 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 TPSG1Q9NRR2 321 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 LY6DQ14210 128 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 K7EP34 96 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
SHROOM4-201ENST00000289292 BVES-AS1Q5T3Y7 98 aa12.35□□□□□ -0.43
SHROOM4-201ENST00000289292 ZNF562Q6V9R5 426 aa12.35□□□□□ -0.43
SHROOM4-201ENST00000289292 Q6ZR03 302 aa12.35□□□□□ -0.43
SHROOM4-201ENST00000289292 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 LINC00477Q96M19 166 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 PLA2G2EQ9NZK7 142 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 ETDBQ3ZM63 59 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 TEX43Q6ZNM6 134 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 TCF15Q12870 199 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 AZU1P20160 251 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 MRPL51Q4U2R6 128 aaKnown RBP12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
SHROOM4-201ENST00000289292 FNDC10F2Z333 226 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 DIAPH2-AS1Q14236 149 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 ZNF134P52741 427 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 LINC01559Q495D7 138 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 YPEL3P61236 119 aaPredicted RBP12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 NSUN5P1Q3KNT7 163 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 NEGR1Q7Z3B1 354 aa12.33□□□□□ -0.44
SHROOM4-201ENST00000289292 CSRP1P21291 193 aaKnown RBP12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 CITED1Q99966 193 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 VCYO14598 125 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 ITGB1BP1O14713 200 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 DKK1O94907 266 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 LYPD1Q8N2G4 141 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 PRSS22Q9GZN4 317 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 ANAPC1Q9H1A4 1944 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 COX8AP10176 69 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 SPACA3Q8IXA5 215 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 ZNF492Q9P255 531 aa12.32□□□□□ -0.44
SHROOM4-201ENST00000289292 TRBV7-1A0A0A6YYK4 115 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms