RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SEPSECSQ9HD40 501 aaKnown RBP4.81□□□□□ -1.64
CD44-204ENST00000279452 CLEC5AQ9NY25 188 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 TNFSF18Q9UNG2 199 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 TIMM9Q9Y5J7 89 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 HLA-DRB4X5D2U9 266 aa4.81□□□□□ -1.64
CD44-204ENST00000279452 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 A0A087X0K7 114 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 TRAV8-2A0A0B4J237 113 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 A0A1W2PPV4 95 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 RNF222A6NCQ9 220 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 H3BMM0 161 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 SLC17A3O00476 420 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 EIF3GO75821 320 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD44-204ENST00000279452 OR10J4P0C629 311 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
CD44-204ENST00000279452 ZNF705BP0CI00 300 aaPredicted RBP4.8□□□□□ -1.64
CD44-204ENST00000279452 CXCL2P19875 107 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 C4BPBP20851 252 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 TAS2R45P59539 299 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 RHOBP62745 196 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 UBE2L3P68036 154 aaKnown RBP4.8□□□□□ -1.64
CD44-204ENST00000279452 GUK1Q16774 197 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 ACOT6Q3I5F7 207 aaPredicted RBP4.8□□□□□ -1.64
CD44-204ENST00000279452 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 IQCF2Q8IXL9 164 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 OR11H2Q8NH07 326 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 CHAC2Q8WUX2 184 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 RPUSD4Q96CM3 377 aaKnown RBP4.8□□□□□ -1.64
CD44-204ENST00000279452 RNF183Q96D59 192 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 RARRES2Q99969 163 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 OVOL2Q9BRP0 275 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 PAXXQ9BUH6 204 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 SLC25A2Q9BXI2 301 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 MRPL32Q9BYC8 188 aaKnown RBP4.8□□□□□ -1.64
CD44-204ENST00000279452 MFFQ9GZY8 342 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 AAMDCQ9H7C9 122 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 XCL2Q9UBD3 114 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 FUT9Q9Y231 359 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 RFNGQ9Y644 331 aa4.8□□□□□ -1.64
CD44-204ENST00000279452 A0A0J9YWU9 116 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 A0A0J9YX75 114 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 H3BQ15 152 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 MRPS12O15235 138 aaKnown RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 PFDN1O60925 122 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 DUSP14O95147 198 aaKnown RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 IGLC2P0DOY2 106 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 ATP6V0CP27449 155 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 CNN1P51911 297 aaKnown RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 RAB2AP61019 212 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 PSG9Q00887 426 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 PSG3Q16557 428 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 KHDC3LQ587J8 217 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 TMEM41BQ5BJD5 291 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 RPL7L1Q6DKI1 246 aaKnown RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 ZFAND6Q6FIF0 208 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 OR10G4Q8NGN3 311 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 OR10G9Q8NGN4 311 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 OR10G7Q8NGN6 311 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 OR10J6PQ8NGY7 276 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 TMEM208Q9BTX3 173 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 PARD6GQ9BYG4 376 aaPredicted RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 SLC35B3Q9H1N7 401 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 SH3BGRL3Q9H299 93 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 OR51M1Q9H341 326 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 HRH4Q9H3N8 390 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 ZNF331Q9NQX6 463 aaPredicted RBP4.79□□□□□ -1.64
CD44-204ENST00000279452 ZNF586Q9NXT0 402 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 TP53TG1Q9Y2A0 90 aa4.79□□□□□ -1.64
CD44-204ENST00000279452 TRBV19A0A075B6N1 114 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 KANTRA0A1W2PQU2 76 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 ZNF705FA8MVS1 300 aaPredicted RBP4.78□□□□□ -1.64
CD44-204ENST00000279452 J3KRW8 73 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 M0R2Z0 102 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 DEFB4AO15263 64 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 HIST1H1EP10412 219 aaKnown RBP4.78□□□□□ -1.64
CD44-204ENST00000279452 M6PRP20645 277 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 CDC34P49427 236 aaPredicted RBP4.78□□□□□ -1.64
CD44-204ENST00000279452 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 SPINK13Q1W4C9 94 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 EXOC3-AS1Q8N2X6 119 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 OR8A1Q8NGG7 326 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 OR2G3Q8NGZ4 309 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 RNF141Q8WVD5 230 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 GNPNAT1Q96EK6 184 aaPredicted RBP4.78□□□□□ -1.64
CD44-204ENST00000279452 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 TMEM14CQ9P0S9 112 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 RPH3ALQ9UNE2 315 aa4.78□□□□□ -1.64
CD44-204ENST00000279452 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 G3V3Q6 166 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 BOLA2-SMG1P6H3BVE0 249 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 M0R3E3 92 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 TAAR5O14804 337 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 JTBO76095 146 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 INSP01308 110 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 MBP02144 154 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 NBEAP1P0C6P0 100 aa4.77□□□□□ -1.65
CD44-204ENST00000279452 CSN1S1P47710 185 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms