RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TOMM20LQ6UXN7 152 aa13.96□□□□□ -0.18
CAPN1-201ENST00000279247 TMEM256Q8N2U0 113 aa13.96□□□□□ -0.18
CAPN1-201ENST00000279247 ZNF502Q8TBZ5 544 aa13.96□□□□□ -0.18
CAPN1-201ENST00000279247 TRGV3P03979 118 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 GZMBP10144 247 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 CAMPP49913 170 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 TMEM95Q3KNT9 176 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 ZNF414Q96IQ9 312 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 HIST1H2BLQ99880 126 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 TMEM14CQ9P0S9 112 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 SIGLEC15Q6ZMC9 328 aa13.95□□□□□ -0.18
CAPN1-201ENST00000279247 PACRGQ96M98 296 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-201ENST00000279247 TMEM183AQ8IXX5 376 aa13.94□□□□□ -0.18
CAPN1-201ENST00000279247 TCEAL7Q9BRU2 100 aa13.94□□□□□ -0.18
CAPN1-201ENST00000279247 DAZAP1Q96EP5 407 aaKnown RBP13.94□□□□□ -0.18
CAPN1-201ENST00000279247 ITPR3Q14573 2671 aa13.94□□□□□ -0.18
CAPN1-201ENST00000279247 SMIM6P0DI80 62 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 TPPP2P59282 170 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 HIGD1CA8MV81 97 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 NUPR1O60356 82 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 SCGB2A1O75556 95 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 GOSR1O95249 250 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 FMC1Q96HJ9 113 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 NEU1Q99519 415 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 AAMDCQ9H7C9 122 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 IGKV2-40A0A087WW87 121 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-201ENST00000279247 ZNF705FA8MVS1 300 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-201ENST00000279247 BMPR1BO00238 502 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 IGKV2D-40P01614 121 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-201ENST00000279247 Q86TA4 180 aa13.93□□□□□ -0.18
CAPN1-201ENST00000279247 SETD2Q9BYW2 2564 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-201ENST00000279247 F2Z2F3 143 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 MRPS12O15235 138 aaKnown RBP13.92□□□□□ -0.18
CAPN1-201ENST00000279247 P01737 135 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 APOHP02749 345 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-201ENST00000279247 RPL19P84098 196 aaKnown RBP13.92□□□□□ -0.18
CAPN1-201ENST00000279247 SSBP4Q9BWG4 385 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-201ENST00000279247 FLNAP21333 2647 aaKnown RBP13.92□□□□□ -0.18
CAPN1-201ENST00000279247 TRBV12-3P01733 135 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 AMBPP02760 352 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 PF4V1P10720 104 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 ATP5G2Q06055 141 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 EEF1AKMT3Q96AZ1 226 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 KLF12Q9Y4X4 402 aa13.92□□□□□ -0.18
CAPN1-201ENST00000279247 ZNF785A8K8V0 405 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 LTAP01374 205 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 NUP35Q8NFH5 326 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 VN1R17PQ8TDU5 208 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 KLK15Q9H2R5 256 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 IGHV4-59P01825 116 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 PAX1P15863 534 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 TPPP3Q9BW30 176 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 MEGF9Q9H1U4 602 aa13.91□□□□□ -0.18
CAPN1-201ENST00000279247 SMIM27A0A1W2PRY6 76 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 IGLV2-11P01706 119 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 DEFB112Q30KQ8 113 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 Q8TAT8 98 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 PGLYRP4Q96LB8 373 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 ZNF331Q9NQX6 463 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-201ENST00000279247 CUBNO60494 3623 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 RPL7P18124 248 aaKnown RBP13.9□□□□□ -0.18
CAPN1-201ENST00000279247 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 ZNF48Q96MX3 618 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-201ENST00000279247 TMSB15BA0A087X1C1 80 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 CRISP2P16562 243 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 LINC01356Q8N9X3 169 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 C8orf49Q96NF6 230 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 DUX5Q96PT3 197 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 MLST8Q9BVC4 326 aa13.9□□□□□ -0.18
CAPN1-201ENST00000279247 SLC25A16P16260 332 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 S100A7AQ86SG5 101 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 BAGE3Q86Y29 109 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 PSG8Q9UQ74 426 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 SMAD5-AS1Q9Y6J3 95 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 CD33P20138 364 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 OR2D3Q8NGH3 330 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 GRAMD2BQ96HH9 432 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 PDZD2O15018 2839 aa13.89□□□□□ -0.19
CAPN1-201ENST00000279247 IGKV3-7A0A075B6H7 116 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 DIRC3C9JPN6 131 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 ZC2HC1AQ96GY0 325 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 RPP21Q9H633 154 aaKnown RBP13.88□□□□□ -0.19
CAPN1-201ENST00000279247 IZUMO1RA6ND01 250 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 K7EQM0 130 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 CSN1S1P47710 185 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 TMEM136Q6ZRR5 245 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 GBGT1Q8N5D6 347 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 TRAV20A0A0B4J274 112 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 DSCR9P59020 149 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 Q5PR19 223 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 PSMG3-AS1Q96PY0 264 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 TXN2Q99757 166 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 ZFAND3Q9H8U3 227 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 RNF24Q9Y225 148 aa13.88□□□□□ -0.19
CAPN1-201ENST00000279247 A6NDX4 124 aa13.87□□□□□ -0.19
CAPN1-201ENST00000279247 OR5R1Q8NH85 324 aa13.87□□□□□ -0.19
CAPN1-201ENST00000279247 SRIP30626 198 aa13.87□□□□□ -0.19
CAPN1-201ENST00000279247 SLAQ13239 276 aa13.87□□□□□ -0.19
CAPN1-201ENST00000279247 FAM231DQ6ZW35 169 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms