RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MBD6Q96DN6 1003 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 ASCL2Q99929 193 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 FZR1Q9UM11 496 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 PSG8Q9UQ74 426 aa3.34□□□□□ -1.87
UBE4A-201ENST00000252108 A0A1B0GUS0 222 aa3.34□□□□□ -1.88
UBE4A-201ENST00000252108 CCL25O15444 150 aa3.34□□□□□ -1.88
UBE4A-201ENST00000252108 FOXA3P55318 350 aaPredicted RBP3.34□□□□□ -1.88
UBE4A-201ENST00000252108 ECSCRQ19T08 205 aa3.34□□□□□ -1.88
UBE4A-201ENST00000252108 C9orf106Q8NAJ2 232 aa3.34□□□□□ -1.88
UBE4A-201ENST00000252108 SIGMAR1Q99720 223 aa3.34□□□□□ -1.88
UBE4A-201ENST00000252108 ANKRD11Q6UB99 2663 aaPredicted RBP3.34□□□□□ -1.88
UBE4A-201ENST00000252108 TRAV3A0A0B4J244 114 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 IGHV1-24A0A0C4DH33 117 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 A0A0G2JLM5 398 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 A0A1B0GXF2 115 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 PCNX2A6NKB5 2137 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 MOSP00540 346 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 LINC00310P59036 64 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 SMAGPQ0VAQ4 97 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 C17orf58Q2M2W7 97 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 ATP1A1-AS1Q5TC04 95 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 TEX36Q5VZQ5 186 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 EBLN2Q6P2I7 272 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 MOB4Q9Y3A3 225 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 DPM2O94777 84 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 NMUP48645 174 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 C11orf44Q8N8P7 122 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 FXYD5Q96DB9 178 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 SLC50A1Q9BRV3 221 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 MEGF9Q9H1U4 602 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 CGB1A6NKQ9 187 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 K7EM74 188 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 PYYP10082 97 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 HLA-DRB4P13762 266 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 LCN12Q6JVE5 192 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 FER1L6-AS1Q8NA97 138 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 SCRT2Q9NQ03 307 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 TP53TG3Q9ULZ0 132 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 F11RQ9Y624 299 aaKnown RBP3.33□□□□□ -1.88
UBE4A-201ENST00000252108 HLA-DRB4X5D2U9 266 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 GCSHP23434 173 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 DLX6P56179 175 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 RIPPLY3P57055 190 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF474Q6S9Z5 364 aaPredicted RBP3.33□□□□□ -1.88
UBE4A-201ENST00000252108 RCHY1Q96PM5 261 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 GAFA1Q96PS6 74 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 TMUB1Q9BVT8 246 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 LRBAP50851 2863 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 MUC21A0A0G2JKD1 596 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 MUC21A0A140T8X8 626 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 OOSP1A8MZH6 123 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 COL8A2P25067 703 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 SRSF1Q07955 248 aaKnown RBP eCLIP3.33□□□□□ -1.88
UBE4A-201ENST00000252108 PSG3Q16557 428 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 MUC21Q5SSG8 566 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 SSBP4Q9BWG4 385 aaPredicted RBP3.33□□□□□ -1.88
UBE4A-201ENST00000252108 GPR179Q6PRD1 2367 aa3.33□□□□□ -1.88
UBE4A-201ENST00000252108 H3BUT2 72 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 K7EMI3 77 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 LOXP28300 417 aaPredicted RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 SRSF2Q01130 221 aaKnown RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 KLK9Q2XQG4 91 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 SAMD5Q5TGI4 173 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 FAM167A-AS1Q96KT0 104 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 SPANXDQ9BXN6 97 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 KLK9Q9UKQ9 250 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 TACC2O95359 2948 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 C2orf70A6NJV1 201 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 C17orf100A8MU93 164 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 FABP5P3A8MUU1 101 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 F8W1H4 67 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 CRPP02741 224 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 PSG1P11464 419 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 PLNP26678 52 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 SHANK2-AS3Q9BTD1 123 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM133Q9H2Q1 129 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 ZDBF2Q9HCK1 2354 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 DNAJC13O75165 2243 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 OR11H12B2RN74 326 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 IGKCP01834 107 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 GATA2P23769 480 aaPredicted RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 FCER1GP30273 86 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 C15orf53Q8NAA6 179 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 OR11H1Q8NG94 326 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 OR11H2Q8NH07 326 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 PRSS22Q9GZN4 317 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 RALYQ9UKM9 306 aaKnown RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 TAX1BP3O14907 124 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 IGLV2-8P01709 118 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 IGHV1-46P01743 117 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 IGHV3-7P01780 117 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 CD40P25942 277 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 DSCR9P59020 149 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 KIR3DS1Q14943 382 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 BCL6BQ8N143 479 aaPredicted RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 GATD1Q8NB37 220 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 IL17DQ8TAD2 202 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF503Q96F45 646 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms