RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ARMS2P0C7Q2 107 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 IGHV1-8P0DP01 117 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 TDGF1P13385 188 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 DGAT2L7PQ6IED9 249 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 CLEC19AQ6UXS0 136 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 PRRC2AP48634 2157 aaKnown RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 NDUFB8O95169 186 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 C8orf46Q8TAG6 207 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 SCGB3A1Q96QR1 104 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 TPSG1Q9NRR2 321 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF492Q9P255 531 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 COX11Q9Y6N1 276 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 E7EQL1 145 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 PRSS2P07478 247 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 HBDP02042 147 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 CFHR2P36980 270 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 HERVK_113P61574 105 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 PRR30Q53SZ7 412 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 DEFB104AQ8WTQ1 72 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 YPEL4Q96NS1 127 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 IGHV1-3A0A0C4DH29 117 aa3.71□□□□□ -1.81
VPS13C-201ENST00000249837 SH2D1AO60880 128 aa3.71□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM213A2RRL7 107 aa3.71□□□□□ -1.81
VPS13C-201ENST00000249837 AMN1Q8IY45 258 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 FAM167A-AS1Q96KT0 104 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 LINC00527Q9UJ94 153 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 A0A1W2PNU3 283 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 ATP5LO75964 103 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 IGLL1P15814 213 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 PDLIM4P50479 330 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 KIR3DS1Q14943 382 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 DPM2O94777 84 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 PRSS57Q6UWY2 283 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 IGHV2-26A0A0B4J1V2 119 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 A0A0G2JLM5 398 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 C5orf64Q2M2E5 130 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 FAM169BQ8N8A8 192 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 JMJD8Q96S16 334 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 FABP5P3A8MUU1 101 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 WT1P19544 449 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 Q6ZS92 163 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 Q86TA4 180 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 ZNF672Q499Z4 452 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 SPACA3Q8IXA5 215 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 ZNF418Q8TF45 676 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 FXYD5Q96DB9 178 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 D6R8Y8 96 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 TGFAP01135 160 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 MSMPQ1L6U9 139 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 MBD3L4A6NDZ8 208 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 MBD3L3A6NE82 208 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 MBD3L5A6NJ08 208 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 GUSBP1Q15486 140 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 TTC9CQ8N5M4 171 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 OR2K2Q8NGT1 345 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 MBD3L2Q8NHZ7 208 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-201ENST00000249837 JKAMPQ9P055 326 aa3.71□□□□□ -1.82
VPS13C-201ENST00000249837 C19orf67A6NJJ6 358 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 PRR20EP86478 221 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 PRR20CP86479 221 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 PRR20DP86480 221 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 PRR20BP86481 221 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 PRR20AP86496 221 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 WFDC12Q8WWY7 111 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 IGLV1-44P01699 117 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 BRWD1-AS2P59051 145 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 RITA1Q96K30 269 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 MRPS16Q9Y3D3 137 aaKnown RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 BUB1B-PAK6H3BSN5 160 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 MS4A6AQ9H2W1 248 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 MRPL27Q9P0M9 148 aaKnown RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 ITGB1BP1O14713 200 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 MRPL51Q4U2R6 128 aaKnown RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 LYRM7Q5U5X0 104 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 A0A1B0GWJ7 208 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 POU2AF1Q16633 256 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 C15orf32Q32M92 178 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 SEC11AP67812 179 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 HSD52Q0P140 79 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 Q6AWC8 147 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 PVRIGQ6DKI7 326 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 VMO1Q7Z5L0 202 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 GOLGB1Q14789 3259 aaKnown RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 MRPL16Q9NX20 251 aaKnown RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 ZNF833PQ6ZTB9 187 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 BCL6BQ8N143 479 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 SHANK2-AS3Q9BTD1 123 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 ZNF256Q9Y2P7 627 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-201ENST00000249837 MUC4Q99102 2169 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 OR4X2Q8NGF9 303 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 SIGLEC8Q9NYZ4 499 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 ERCC8Q13216 396 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 FAM74A4Q5TZK3 123 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 VKORC1Q9BQB6 163 aa3.7□□□□□ -1.82
VPS13C-201ENST00000249837 LOXP28300 417 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-201ENST00000249837 EBLN2Q6P2I7 272 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM155Q4W5P6 130 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms