RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 Q6ZRG5 221 aa15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 TMEM37Q8WXS4 190 aa15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 NEU1Q99519 415 aa15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 TRAV10A0A0B4J240 114 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 MRPS12O15235 138 aaKnown RBP15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 CXCL3P19876 107 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 HIST1H1AQ02539 215 aaPredicted RBP15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 OPCMLQ14982 345 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 SPINK13Q1W4C9 94 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 VWC2Q2TAL6 325 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 AMTNQ6UX39 209 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 BPIFA4PQ86YQ2 179 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 OR11H7Q8NGC8 314 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 BATF3Q9NR55 127 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 RFNGQ9Y644 331 aa15.2■□□□□ 0.02
HCFC1R1-201ENST00000248089 SMIM9A6NGZ8 99 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 A8MTW9 85 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 H3BTX0 84 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 M0R2Z0 102 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 FGF7P21781 194 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 LCN15Q6UWW0 184 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 C1orf158Q8N1D5 194 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 TMEM208Q9BTX3 173 aa15.19■□□□□ 0.02
HCFC1R1-201ENST00000248089 TMEM189A5PLL7 270 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 HBE1P02100 147 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 RLN2P04090 185 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 B2MP61769 119 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PRR20EP86478 221 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PRR20CP86479 221 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PRR20DP86480 221 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PRR20BP86481 221 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PRR20AP86496 221 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PSG3Q16557 428 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 C12orf74Q32Q52 190 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 OR1L4Q8NGR5 311 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 IGF2BP2-AS1Q96M15 143 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 PFDN5Q99471 154 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 NMES1Q9C002 83 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 DNAJC4Q9NNZ3 241 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 SLC39A9Q9NUM3 307 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 OR5AC2Q9NZP5 309 aa15.18■□□□□ 0.02
HCFC1R1-201ENST00000248089 SSNA1O43805 119 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 INSP01308 110 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 AMBPP02760 352 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 CXCL2P19875 107 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 RHOBP62745 196 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 LGALS9CQ6DKI2 356 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 BAP18Q8IXM2 172 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 OR8A1Q8NGG7 326 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 SLC50A1Q9BRV3 221 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 MARVELD1Q9BSK0 173 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 PPP1R14DQ9NXH3 145 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 PXMP4Q9Y6I8 212 aa15.17■□□□□ 0.02
HCFC1R1-201ENST00000248089 DEFB131BA0A096LNP1 70 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 TRAV5A0A0B4J249 113 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 LOC102723971A0A1B0GUV8 181 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 E5RGE8 158 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 BOLA2-SMG1P6H3BVE0 249 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 SLC17A3O00476 420 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 RPL29P47914 159 aaKnown RBP15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 ATP6V1FQ16864 119 aa15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 RPUSD4Q96CM3 377 aaKnown RBP15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 ZNF331Q9NQX6 463 aaPredicted RBP15.16■□□□□ 0.02
HCFC1R1-201ENST00000248089 SPART-AS1P0CW21 52 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 TCTAP57738 103 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 NHLH2Q02577 135 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 RRN3P1Q2M238 152 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 OR5C1Q8NGR4 320 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 THAP6Q8TBB0 222 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 SLC25A31Q9H0C2 315 aa15.15■□□□□ 0.02
HCFC1R1-201ENST00000248089 IGHV4-4A0A075B6R2 117 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 TRAV12-2A0A075B6T6 113 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 IGLC2P0DOY2 106 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 H2BFSP57053 126 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 CYCSP99999 105 aaKnown RBP15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 CLINT1Q14677 625 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 RPP25LQ8N5L8 163 aaKnown RBP15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 NPCDR1Q9BY65 106 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 APLNQ9ULZ1 77 aa15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 EPPK1P58107 5090 aaKnown RBP15.14■□□□□ 0.01
HCFC1R1-201ENST00000248089 H0YIZ8 118 aa15.13■□□□□ 0.01
HCFC1R1-201ENST00000248089 H3BQ15 152 aa15.13■□□□□ 0.01
HCFC1R1-201ENST00000248089 CRXO43186 299 aaPredicted RBP15.13■□□□□ 0.01
HCFC1R1-201ENST00000248089 MPDU1O75352 247 aa15.13■□□□□ 0.01
HCFC1R1-201ENST00000248089 FAM222AQ5U5X8 452 aa15.13■□□□□ 0.01
HCFC1R1-201ENST00000248089 YTHDF2Q9Y5A9 579 aaKnown RBP15.13■□□□□ 0.01
HCFC1R1-201ENST00000248089 PPP1R1CQ8WVI7 109 aa15.12■□□□□ 0.01
HCFC1R1-201ENST00000248089 DKK2Q9UBU2 259 aa15.12■□□□□ 0.01
HCFC1R1-201ENST00000248089 TEX48A0A1B0GUV7 120 aa15.11■□□□□ 0.01
HCFC1R1-201ENST00000248089 ZNF705GA8MUZ8 300 aaPredicted RBP15.11■□□□□ 0.01
HCFC1R1-201ENST00000248089 CHAC2Q8WUX2 184 aa15.11■□□□□ 0.01
HCFC1R1-201ENST00000248089 NIPSNAP3BQ9BS92 247 aa15.11■□□□□ 0.01
HCFC1R1-201ENST00000248089 RNF126Q9BV68 326 aa15.11■□□□□ 0.01
HCFC1R1-201ENST00000248089 PRM2P04554 102 aa15.1■□□□□ 0.01
HCFC1R1-201ENST00000248089 GUK1Q16774 197 aa15.1■□□□□ 0.01
HCFC1R1-201ENST00000248089 GCSAMLQ5JQS6 135 aa15.1■□□□□ 0.01
HCFC1R1-201ENST00000248089 OR10J6PQ8NGY7 276 aa15.1■□□□□ 0.01
HCFC1R1-201ENST00000248089 KMT2AQ03164 3969 aa15.1■□□□□ 0.01
HCFC1R1-201ENST00000248089 PRAC2D3DTV9 90 aa15.09■□□□□ 0.01
HCFC1R1-201ENST00000248089 PET100P0DJ07 73 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms