RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FAM90A1Q86YD7 464 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 CENPVL3A0A0U1RRI6 287 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 PSPNO60542 156 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 COX7A1P24310 79 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 GDF5OSQ5U4N7 250 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 TMEM14BQ9NUH8 114 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 LTBP1Q14766 1721 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 IQCF6A8MYZ5 107 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 SYNJ2BPP57105 145 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 HERVK_113P63121 156 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 MLANAQ16655 118 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 PRR7Q8TB68 274 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 MYOD1P15172 320 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 INSL3P51460 131 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 FAM120AOSQ5T036 256 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 SPINK14Q6IE38 97 aa10.37□□□□□ -0.75
VAMP4-201ENST00000236192 ATG2BQ96BY7 2078 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 TNS1Q9HBL0 1735 aaKnown RBP10.36□□□□□ -0.75
VAMP4-201ENST00000236192 TM4SF5O14894 197 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 VPREB3Q9UKI3 123 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 LRRK1Q38SD2 2015 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 CACNA1DQ01668 2161 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 ODF1Q14990 250 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 TRAV13-1A0A0B4J241 112 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 NDUFA7O95182 113 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 ZNF295-AS1Q8N0V1 137 aa10.36□□□□□ -0.75
VAMP4-201ENST00000236192 KLK10O43240 276 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 MNX1P50219 401 aaPredicted RBP10.35□□□□□ -0.75
VAMP4-201ENST00000236192 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 IGHV3-64A0A075B6Q5 118 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 IGHV1-45A0A0A0MS14 117 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 CD7P09564 240 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 Q6Q795 121 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 A0A1W2PR77 199 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 DUX5Q96PT3 197 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 MDC1Q14676 2089 aaKnown RBP10.35□□□□□ -0.75
VAMP4-201ENST00000236192 F5H768 121 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 MORN5Q5VZ52 161 aa10.35□□□□□ -0.75
VAMP4-201ENST00000236192 COL4A5P29400 1685 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 IGKV2-40A0A087WW87 121 aaPredicted RBP10.34□□□□□ -0.75
VAMP4-201ENST00000236192 IGKV2D-40P01614 121 aaPredicted RBP10.34□□□□□ -0.75
VAMP4-201ENST00000236192 CELA2AP08217 269 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 CFAP126Q5VTH2 177 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 ZCCHC24Q8N2G6 241 aaKnown RBP10.34□□□□□ -0.75
VAMP4-201ENST00000236192 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 CSDC2Q9Y534 153 aaKnown RBP10.34□□□□□ -0.75
VAMP4-201ENST00000236192 PLXNA4Q9HCM2 1894 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 TCL1BO95988 128 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 FAM214BQ7L5A3 538 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 METTL26Q96S19 204 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 V9GYY9 64 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 A4D1N5 150 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 CR1LQ2VPA4 569 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 IL17RELQ6ZVW7 336 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 LINC00527Q9UJ94 153 aa10.34□□□□□ -0.75
VAMP4-201ENST00000236192 Q6ZSR3 168 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM219Q86XT9 240 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 CCL17Q92583 94 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.76
VAMP4-201ENST00000236192 IGLV2-8P01709 118 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 RNASE1P07998 156 aaKnown RBP10.33□□□□□ -0.76
VAMP4-201ENST00000236192 TM4SF4P48230 202 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 WISP1O95388 367 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 RSPO1Q2MKA7 263 aaPredicted RBP10.33□□□□□ -0.76
VAMP4-201ENST00000236192 ITLN1Q8WWA0 313 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 NPC2P61916 151 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM240Q5SV17 173 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 Q8N1Y9 231 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 C8orf49Q96NF6 230 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 RPP25Q9BUL9 199 aaKnown RBP10.32□□□□□ -0.76
VAMP4-201ENST00000236192 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 TFF1P04155 84 aa10.32□□□□□ -0.76
VAMP4-201ENST00000236192 PLXNB3Q9ULL4 1909 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 LTBRP36941 435 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 PRR30Q53SZ7 412 aaPredicted RBP10.31□□□□□ -0.76
VAMP4-201ENST00000236192 MYOFQ9NZM1 2061 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 PLXNA2O75051 1894 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 TRAV21A0A0B4J279 112 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
VAMP4-201ENST00000236192 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
VAMP4-201ENST00000236192 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
VAMP4-201ENST00000236192 RBMY1A1P0DJD3 496 aaKnown RBP10.31□□□□□ -0.76
VAMP4-201ENST00000236192 RBMY1CP0DJD4 496 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 RBMY1FQ15415 496 aaKnown RBP10.31□□□□□ -0.76
VAMP4-201ENST00000236192 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 KNTC1P50748 2209 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 PLA2G5P39877 138 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM133Q9H2Q1 129 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM141Q96I45 108 aa10.31□□□□□ -0.76
VAMP4-201ENST00000236192 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 378.6 ms