RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Mlf1Q9QWV4 267 aa11.27□□□□□ -0.61
Nup88-201ENSMUST00000035283 D830044I16RikA0A1D5RM53 117 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Efna2P52801 209 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Spink11Q09TK7 88 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Btf3Q64152 204 aaKnown RBP11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Klre1Q8CJC7 226 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ido2Q8R0V5 405 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 SmagpQ99KC7 97 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tex43Q9D9I1 141 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr1016A2ASV2 309 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr1097A2AVA9 315 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 H60bB1B212 251 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm9972E9Q053 102 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm10020E9QAZ2 204 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm10203F6QJ09 66 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 MdkP12025 140 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 G6pcP35576 357 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm813Q3UWK9 176 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 GfralQ6SJE0 393 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Abhd17bQ7M759 288 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr968Q8VFN4 314 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ms4a6cQ99N08 217 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Rpl15Q9CZM2 204 aaKnown RBP11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 Acp1Q9D358 158 aa11.26□□□□□ -0.61
Nup88-201ENSMUST00000035283 PkdrejQ9Z0T6 2126 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm20773A0A0A6YXW2 232 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm20807A0A0A6YXX7 232 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Trbv13-3A0A0B4J1H2 113 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Vmn1r232A2RTT5 351 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm5129F6YHA9 99 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm21719J3KMI9 230 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm20873J3QMQ9 232 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm20795J3QP49 232 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 A630023A22RikJ3QP60 199 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm21310J3QQ23 232 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Bcl2P10417 236 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ptbp1P17225 527 aaKnown RBP11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Crebl2Q32M00 123 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm21440Q3TTD8 232 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Zfp872Q3UVL3 465 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cdv3Q4VAA2 281 aaKnown RBP11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 RalyQ64012 312 aaKnown RBP11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Slc24a4Q8CGQ8 622 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Znhit1Q8R331 154 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cacng8Q8VHW2 423 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 B3gnt9Q8VI16 399 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Defb3Q9WTL0 63 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Trav6-1A0A075B5Z8 112 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ighv5-2A0A0A6YVX8 117 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Igkv4-51A0N8I8 119 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Wdr1O88342 606 aaKnown RBP11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 RelP15307 587 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Vipr2P41588 437 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 AesP63002 197 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 H2-DMb2Q31099 261 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr875Q7TRE5 310 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Mob1bQ8BPB0 216 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Smim4Q8C1Q6 80 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cdc34Q8CFI2 235 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr344Q8VFP9 309 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr1408Q8VG32 310 aa11.25□□□□□ -0.61
Nup88-201ENSMUST00000035283 Myo7bQ99MZ6 2113 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 SpegQ62407 3262 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Vmn1r78K7N608 313 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Fcer1gP20491 86 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Rbp2Q08652 134 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Zfp386Q1WWJ5 626 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Lyplal1Q3UFF7 239 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Prss44Q402U7 372 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Defa-rs10Q64263 91 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Foxl1Q64731 336 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Kcnip4Q6PHZ8 250 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 IqcjQ8BPW0 110 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr368Q8VF22 327 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr57Q8VGU7 319 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Derl1Q99J56 251 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Lmntd1Q9D4C1 413 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ssmem1Q9D9Y8 244 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Mrps11Q9DCA2 191 aaKnown RBP11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tusc2Q9WVF8 110 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Trav5-4A0A075B652 114 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 BC053393A0A0B4J1F6 192 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm14443A2ARX0 610 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Foxi3E0CZH3 425 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Inafm1E9PV59 130 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr467L7N455 308 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr92L7N475 312 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 SncaO55042 140 aaKnown RBP11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Pcnx2Q5DU28 2122 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ankrd33Q8BXP5 385 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Dda1Q9D9Z5 102 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Chst5Q9QUP4 395 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Prss30Q9QYZ9 310 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Syngr4Q9Z1L2 233 aa11.24□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr284A0A0U1RP76 321 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Zfp931A2AHM2 298 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Dkk1O54908 272 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Syngr2O55101 224 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 P04212 136 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Fgf5P15656 264 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 130.7 ms