RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 PATE2Q6UY27 113 aa11.72□□□□□ -0.53
COLCA2-207ENST00000639470 SMIM8Q96KF7 97 aa11.72□□□□□ -0.53
COLCA2-207ENST00000639470 TMEM147Q9BVK8 224 aa11.72□□□□□ -0.53
COLCA2-207ENST00000639470 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
COLCA2-207ENST00000639470 IL5P05113 134 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 LINC00869P0C866 280 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 GALR1P47211 349 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 PSG9Q00887 426 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 MITD1Q8WV92 249 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 C1QTNF4Q9BXJ3 329 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 PFDN2Q9UHV9 154 aa11.71□□□□□ -0.53
COLCA2-207ENST00000639470 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
COLCA2-207ENST00000639470 M0R2Z0 102 aa11.7□□□□□ -0.54
COLCA2-207ENST00000639470 LYRM1O43325 122 aa11.7□□□□□ -0.54
COLCA2-207ENST00000639470 OR5G3P0C626 314 aa11.7□□□□□ -0.54
COLCA2-207ENST00000639470 DLK1P80370 383 aa11.7□□□□□ -0.54
COLCA2-207ENST00000639470 MORN5Q5VZ52 161 aa11.7□□□□□ -0.54
COLCA2-207ENST00000639470 C7orf66A4D0T2 115 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 CENPXA8MT69 81 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 C11orf94C9JXX5 98 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 H3BTX0 84 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 TCRBP04435 133 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
COLCA2-207ENST00000639470 SPINK13Q1W4C9 94 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 C7orf50Q9BRJ6 194 aaKnown RBP11.69□□□□□ -0.54
COLCA2-207ENST00000639470 RPRMQ9NS64 109 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 HIGD1AQ9Y241 93 aa11.69□□□□□ -0.54
COLCA2-207ENST00000639470 A6NHS1 94 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 FAM25EA8MYX2 175 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 FAM222AQ5U5X8 452 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 NEU1Q99519 415 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 ARL6Q9H0F7 186 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 BATF3Q9NR55 127 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 NUDT15Q9NV35 164 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 SLC45A2Q9UMX9 530 aa11.68□□□□□ -0.54
COLCA2-207ENST00000639470 LSM5Q9Y4Y9 91 aaKnown RBP11.68□□□□□ -0.54
COLCA2-207ENST00000639470 TRAV12-2A0A075B6T6 113 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 A8MTW9 85 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 ZNF705GA8MUZ8 300 aaPredicted RBP11.67□□□□□ -0.54
COLCA2-207ENST00000639470 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
COLCA2-207ENST00000639470 CRXO43186 299 aaPredicted RBP11.67□□□□□ -0.54
COLCA2-207ENST00000639470 HYPMO75409 117 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 CFDP00746 253 aaPredicted RBP11.67□□□□□ -0.54
COLCA2-207ENST00000639470 OR11H7Q8NGC8 314 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 OR10P1Q8NGE3 313 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 CLUHP3Q96NS8 147 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 MGST2Q99735 147 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
COLCA2-207ENST00000639470 FRAS1Q86XX4 4008 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 VPS13DQ5THJ4 4388 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 LOC102723971A0A1B0GUV8 181 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 K7EPK0 472 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 HTN3P15516 51 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 MEOX2P50222 304 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 PLP1P60201 277 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 RAP2BP61225 183 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 RNF126Q9BV68 326 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 DKK2Q9UBU2 259 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 YTHDF2Q9Y5A9 579 aaKnown RBP11.66□□□□□ -0.54
COLCA2-207ENST00000639470 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
COLCA2-207ENST00000639470 AGPAT2O15120 278 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 TSC22D2O75157 780 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 CST7O76096 145 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 AMBPP02760 352 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 CXCL3P19876 107 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
COLCA2-207ENST00000639470 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
COLCA2-207ENST00000639470 NPVFQ9HCQ7 196 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 MGAT4CQ9UBM8 478 aa11.65□□□□□ -0.54
COLCA2-207ENST00000639470 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 SLC17A3O00476 420 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 SPART-AS1P0CW21 52 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 AZU1P20160 251 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 TAS2R30P59541 319 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 HIST1H1AQ02539 215 aaPredicted RBP11.64□□□□□ -0.55
COLCA2-207ENST00000639470 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 GOLT1BQ9Y3E0 138 aa11.64□□□□□ -0.55
COLCA2-207ENST00000639470 TRAV5A0A0B4J249 113 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 IGSF23A1L1A6 192 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 PRAC2D3DTV9 90 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 HBE1P02100 147 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 BCAP31P51572 246 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 TCTAP57738 103 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 FCN2Q15485 313 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 MIC13Q5XKP0 118 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 C12orf45Q8N5I9 185 aaPredicted RBP11.63□□□□□ -0.55
COLCA2-207ENST00000639470 TMEM37Q8WXS4 190 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 GPR82Q96P67 336 aa11.63□□□□□ -0.55
COLCA2-207ENST00000639470 A0A087X0K7 114 aa11.62□□□□□ -0.55
COLCA2-207ENST00000639470 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
COLCA2-207ENST00000639470 L7N2F9 121 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms