RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 KLRB1Q12918 225 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 GDF5OSQ5U4N7 250 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 LEMD1Q68G75 181 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 ZNF705AQ6ZN79 300 aaPredicted RBP6.4□□□□□ -1.39
GPC3-204ENST00000631057 RNF152Q8N8N0 203 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 NPBQ8NG41 125 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 NEU4Q8WWR8 484 aaPredicted RBP6.4□□□□□ -1.39
GPC3-204ENST00000631057 BORCS7Q96B45 105 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 MDFIQ99750 246 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 SHANK2-AS3Q9BTD1 123 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 SNHG12Q9BXW3 62 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 GSX1Q9H4S2 264 aaPredicted RBP6.4□□□□□ -1.39
GPC3-204ENST00000631057 PAM16Q9Y3D7 125 aa6.4□□□□□ -1.39
GPC3-204ENST00000631057 LOC105371242A0A075B767 164 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 ODF3BA8MYP8 253 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 H3BRN7 92 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 HSBP1O75506 76 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 NDUFA3O95167 84 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 HOXB4P17483 251 aaPredicted RBP6.39□□□□□ -1.39
GPC3-204ENST00000631057 PRTN3P24158 256 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 CAMPP49913 170 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
GPC3-204ENST00000631057 ASPHD1Q5U4P2 390 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 RBPMS2Q6ZRY4 209 aaKnown RBP6.39□□□□□ -1.39
GPC3-204ENST00000631057 LHFPL4Q7Z7J7 247 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 NIT1Q86X76 327 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 BPIFA4PQ86YQ2 179 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 LYPD1Q8N2G4 141 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 Q8N976 141 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 OR4F17Q8NGA8 305 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 CFHR4Q92496 578 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 SGK494Q96LW2 274 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
GPC3-204ENST00000631057 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 RNF114Q9Y508 228 aa6.39□□□□□ -1.39
GPC3-204ENST00000631057 NBASA2RRP1 2371 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 SPTBN1Q01082 2364 aaKnown RBP6.38□□□□□ -1.39
GPC3-204ENST00000631057 OOSP1A8MZH6 123 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 NPIPB6E9PJ23 425 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 H3BTX0 84 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 K7EQM0 130 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 HLA-DRB1P01911 266 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 C3orf79P0CE67 100 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 RNF224P0DH78 156 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 NTF3P20783 257 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 GPR6P46095 362 aaPredicted RBP6.38□□□□□ -1.39
GPC3-204ENST00000631057 ARF6P62330 175 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 C5orf64Q2M2E5 130 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 LDLRAD2Q5SZI1 272 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 CCDC144NLQ6NUI1 221 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 TCF24Q7RTU0 167 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 RNF125Q96EQ8 232 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 C16orf92Q96LL3 132 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 ZNF48Q96MX3 618 aaPredicted RBP6.38□□□□□ -1.39
GPC3-204ENST00000631057 LAMA5O15230 3695 aa6.38□□□□□ -1.39
GPC3-204ENST00000631057 TRBV19A0A075B6N1 114 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 NPIPB5A8MRT5 1133 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 VWC2LB2RUY7 222 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 COL8A1P27658 744 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 MFAP4P55083 255 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 ADORA2A-AS1P86434 159 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 TDRG1Q3Y452 100 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 RNASEKQ6P5S7 137 aaKnown RBP6.37□□□□□ -1.39
GPC3-204ENST00000631057 LINC00322Q6ZN03 302 aaPredicted RBP6.37□□□□□ -1.39
GPC3-204ENST00000631057 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 PRNTQ86SH4 94 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 FAM19A2Q8N3H0 131 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 KIR3DL3Q8N743 410 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 TMEM75Q8N9X5 138 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 OR2D3Q8NGH3 330 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 PGLYRP4Q96LB8 373 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
GPC3-204ENST00000631057 PRORYQ9H606 182 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 ZFP30Q9Y2G7 519 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 HILPDAQ9Y5L2 63 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 SPTBN4Q9H254 2564 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 KALRNO60229 2985 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 DCHS1Q96JQ0 3298 aa6.37□□□□□ -1.39
GPC3-204ENST00000631057 WI2-2373I1.2A0A1W2PRP0 233 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 M0R2Z0 102 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 CHEK1O14757 476 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 TCAPO15273 167 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 GNG7O60262 68 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 IGLV2-11P01706 119 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 IGLC2P0DOY2 106 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 RPL11P62913 178 aaKnown RBP6.36□□□□□ -1.39
GPC3-204ENST00000631057 KLRD1Q13241 179 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 PDE6HQ13956 83 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 HES1Q14469 280 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 PMCHL1Q16048 86 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 SPATA45Q537H7 98 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 CYB5R2Q6BCY4 276 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 EXOC3-AS1Q8N2X6 119 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 ZNF491Q8N8L2 437 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 GTSF1Q8WW33 167 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 ARPC1AQ92747 370 aa6.36□□□□□ -1.39
GPC3-204ENST00000631057 COL6A6A6NMZ7 2263 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms